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CG6106 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32816, updated on 9-Dec-2024

Summary

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Official Symbol
CG6106provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030914
Locus tag
Dmel_CG6106
See related
AllianceGenome:FB:FBgn0030914
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6106
Summary
Predicted to enable allantoinase activity. Predicted to be involved in purine nucleobase catabolic process. Predicted to be active in cytoplasm. Is expressed in dorsal pharyngeal muscle cell; larval muscle system; and larval somatic muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG6106 in Genome Data Viewer
Location:
17A7-17A7; 1-60 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18358881..18362527)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18252914..18256560)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kairos Neighboring gene long non-coding RNA:CR43686 Neighboring gene Cyclic-AMP response element binding protein B Neighboring gene porcupine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster. Cridland JM, et al. Genetics, 2020 Sep. PMID 32737121, Free PMC Article
  2. A genome-wide RNAi screen identifies MASK as a positive regulator of cytokine receptor stability. Fisher KH, et al. J Cell Sci, 2018 Jul 6. PMID 29848658, Free PMC Article
  3. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables allantoinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables allantoinase activity IEA
Inferred from Electronic Annotation
more info
  
enables cobalt ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in allantoin catabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in purine nucleobase catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG6106-PA
CG6106-PB
NP_001285403.1
NP_573287.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    18358881..18362527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298474.1 → NP_001285403.1  uncharacterized protein Dmel_CG6106, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285403.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JZT9, Q8SZ91, Q9VWW1
    Conserved Domains (1) summary
    cd01315
    Location:2 → 473
    L-HYD_ALN; L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in ...

  2. NM_133059.3 → NP_573287.1  uncharacterized protein Dmel_CG6106, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_573287.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JZT9, Q8SZ91, Q9VWW1
    Related
    FBpp0074325
    Conserved Domains (1) summary
    cd01315
    Location:2 → 473
    L-HYD_ALN; L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7JZT9 Q7JZT9
Q9VWW1 Q9VWW1

Gene LinkOut

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