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r-cup ryder cup [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33075, updated on 4-Jan-2025

Summary

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Official Symbol
r-cupprovided by FlyBase
Official Full Name
ryder cupprovided by FlyBase
Primary source
FLYBASE:FBgn0031142
Locus tag
Dmel_CG10998
See related
AllianceGenome:FB:FBgn0031142
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG10998; Dmel\CG10998
Summary
Is expressed in elongation stage spermatid and primary spermatocyte. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See r-cup in Genome Data Viewer
Location:
19E7-19E7; 1-65 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (21023390..21025888, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20894417..20896915, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Post-meiotic transcription in Drosophila testes. Barreau C, et al. Development, 2008 Jun. PMID 18434411
  2. Endogenously imprinted genes in Drosophila melanogaster. McEachern LA, et al. Mol Genet Genomics, 2014 Aug. PMID 24658702
  3. Systematic screening of a Drosophila ORF library in vivo uncovers Wnt/Wg pathway components. Schertel C, et al. Dev Cell, 2013 Apr 29. PMID 23583758
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ryder cup
Names
CG10998-PA
r-cup-PA
ryder-cup

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    21023390..21025888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134575.2 → NP_608419.1  ryder cup [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608419.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YTX3, Q9VRD3
    Related
    FBpp0076961, FBtr0077269
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7YTX3 Q7YTX3
Q9VRD3 Q9VRD3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
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