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CG5080 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33299, updated on 4-Jan-2025

Summary

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Official Symbol
CG5080provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031313
Locus tag
Dmel_CG5080
See related
AllianceGenome:FB:FBgn0031313
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CT16297; Dmel\CG5080
Summary
Located in plasma membrane. Is expressed in several structures, including adult head; embryonic/larval lateral glial cell; ganglia; larval muscle cell; and trunk visceral muscle primordium. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG5080 in Genome Data Viewer
Location:
21F1-21F1; 2-2 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (1160290..1163886, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (1160290..1163886, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting 29 Neighboring gene capulet Neighboring gene antisense RNA:CR43767 Neighboring gene Transport and Golgi organization 14 Neighboring gene Integrator 14 Neighboring gene uncharacterized protein Neighboring gene Phospholipase A2 activator protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. mef2 activity levels differentially affect gene expression during Drosophila muscle development. Elgar SJ, et al. Proc Natl Acad Sci U S A, 2008 Jan 22. PMID 18198273, Free PMC Article
  2. Differential regulation of mesodermal gene expression by Drosophila cell type-specific Forkhead transcription factors. Zhu X, et al. Development, 2012 Apr. PMID 22378636, Free PMC Article
  3. Two sequential gene expression programs bridged by cell division support long-distance collective cell migration. Sun J, et al. Development, 2024 May 15. PMID 38646822, Free PMC Article
  4. The genomic response of the Drosophila embryo to JNK signaling. Jasper H, et al. Dev Cell, 2001 Oct. PMID 11703947
  5. GMAP is an Atg8a-interacting protein that regulates Golgi turnover in Drosophila. Rahman A, et al. Cell Rep, 2022 May 31. PMID 35649355, Free PMC Article

See all (42) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG5080-PA
CG5080-PB
CG5080-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    1160290..1163886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134734.3 → NP_608578.1  uncharacterized protein Dmel_CG5080, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608578.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K3E2
    Related
    FBpp0077646
    Conserved Domains (1) summary
    COG1196
    Location:32 → 314
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. NM_001272929.1 → NP_001259858.1  uncharacterized protein Dmel_CG5080, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259858.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K3E2
    Conserved Domains (1) summary
    COG1196
    Location:32 → 314
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. NM_164406.2 → NP_722684.1  uncharacterized protein Dmel_CG5080, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722684.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K3E2
    Related
    FBpp0077647
    Conserved Domains (1) summary
    COG1196
    Location:32 → 314
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7K3E2 Q7K3E2

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