U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG3609 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33421, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
CG3609provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031418
Locus tag
Dmel_CG3609
See related
AllianceGenome:FB:FBgn0031418
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CT12127; Dmel\CG3609
Summary
Predicted to enable D-xylose 1-dehydrogenase (NADP+) activity. Predicted to be involved in D-xylose catabolic process. Is expressed in adult head and adult heart. Orthologous to human DHDH (dihydrodiol dehydrogenase). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG3609 in Genome Data Viewer
Location:
22E1-22E1; 2-6 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2372455..2374627, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2372455..2374627, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene AXIN1 up-regulated 1 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44982 Neighboring gene uncharacterized protein Neighboring gene Ataxin 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Introgression in the Drosophila subobscura--D. Madeirensis sister species: evidence of gene flow in nuclear genes despite mitochondrial differentiation. Herrig DK, et al. Evolution, 2014 Mar. PMID 24152112, Free PMC Article
  2. The expression pattern of the Drosophila vesicular glutamate transporter: a marker protein for motoneurons and glutamatergic centers in the brain. Mahr A, et al. Gene Expr Patterns, 2006 Mar. PMID 16378756
  3. New comparative genomics approach reveals a conserved health span signature across species. Antosh M, et al. Aging (Albany NY), 2011 Jun. PMID 21775776, Free PMC Article
  4. Ancient Male Recombination Shaped Genetic Diversity of Neo-Y Chromosome in Drosophila albomicans. Satomura K, et al. Mol Biol Evol, 2016 Feb. PMID 26494844
  5. Loss of Nardilysin, a Mitochondrial Co-chaperone for α-Ketoglutarate Dehydrogenase, Promotes mTORC1 Activation and Neurodegeneration. Yoon WH, et al. Neuron, 2017 Jan 4. PMID 28017472, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables D-xylose 1-dehydrogenase (NADP+) activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in D-xylose catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG3609-PA
CG3609-PB
CG3609-PC
NP_001188684.1
NP_001259931.1
NP_608675.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    2372455..2374627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134831.3 → NP_608675.1  uncharacterized protein Dmel_CG3609, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608675.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VQB4
    Related
    FBpp0077468
    Conserved Domains (3) summary
    COG0673
    Location:5 → 292
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam01408
    Location:5 → 123
    GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
    cl21649
    Location:138 → 198
    GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain

  2. NM_001273002.1 → NP_001259931.1  uncharacterized protein Dmel_CG3609, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259931.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VQB4
    Conserved Domains (3) summary
    COG0673
    Location:5 → 292
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam01408
    Location:5 → 123
    GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
    cl21649
    Location:138 → 198
    GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain

  3. NM_001201755.2 → NP_001188684.1  uncharacterized protein Dmel_CG3609, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188684.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VQB4
    Conserved Domains (3) summary
    COG0673
    Location:5 → 292
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam01408
    Location:5 → 123
    GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
    cl21649
    Location:138 → 198
    GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VQB4 Q9VQB4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools