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Ccdc85 Ccdc85 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33509, updated on 4-Jan-2025

Summary

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Official Symbol
Ccdc85provided by FlyBase
Official Full Name
Ccdc85provided by FlyBase
Primary source
FLYBASE:FBgn0031488
Locus tag
Dmel_CG17265
See related
AllianceGenome:FB:FBgn0031488
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG17265; Dmel\CG17265
Summary
Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Is expressed in several structures, including dorsal ectoderm; dorsal ectoderm anlage; dorsal epidermis primordium; embryonic epipharynx; and epithelium. Orthologous to several human genes including CCDC85C (coiled-coil domain containing 85C). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See Ccdc85 in Genome Data Viewer
Location:
23C4-23C4; 2-8 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2999286..3016069)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2999286..3016069)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Bem46 Neighboring gene okra Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene alpha1,4-galactosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ASPP proteins discriminate between PP1 catalytic subunits through their SH3 domain and the PP1 C-tail. Bertran MT, et al. Nat Commun, 2019 Feb 15. PMID 30770806, Free PMC Article
  2. Notch ligand activity is modulated by glycosphingolipid membrane composition in Drosophila melanogaster. Hamel S, et al. J Cell Biol, 2010 Feb 22. PMID 20176925, Free PMC Article
  3. The Hox proteins Ubx and AbdA collaborate with the transcription pausing factor M1BP to regulate gene transcription. Zouaz A, et al. EMBO J, 2017 Oct 2. PMID 28871058, Free PMC Article
  4. Evidence for large domains of similarly expressed genes in the Drosophila genome. Spellman PT, et al. J Biol, 2002. PMID 12144710, Free PMC Article
  5. A genomewide screen for components of the RNAi pathway in Drosophila cultured cells. Dorner S, et al. Proc Natl Acad Sci U S A, 2006 Aug 8. PMID 16882716, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: 3004458-3004518 mobile_element_type = transposon:INE-1{}4949

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
Ccdc85
Names
CG17265-PA
Ccdc85-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    2999286..3016069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134890.3 → NP_608734.2  Ccdc85 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608734.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95SC8, Q9VQK1
    Related
    FBpp0077331
    Conserved Domains (1) summary
    pfam10226
    Location:283 → 389
    DUF2216; Uncharacterized conserved proteins (DUF2216)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95SC8 Q95SC8
Q9VQK1 Q9VQK1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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