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CG17715 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355129, updated on 4-Jan-2025

Summary

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Official Symbol
CG17715provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0041004
Locus tag
Dmel_CG17715
See related
AllianceGenome:FB:FBgn0041004
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE07178; BcDNA:RE63764; CG18603; Dmel\CG17715
Summary
Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in adult head. Orthologous to human TMEM65 (transmembrane protein 65). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG17715 in Genome Data Viewer
Location:
40F7-40F7; 2-54 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22844220..22854541)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22736952..22747273)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43266 Neighboring gene light Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of heterochromatic genes of Drosophila. Yasuhara JC, et al. Proc Natl Acad Sci U S A, 2005 Aug 2. PMID 16033869, Free PMC Article
  2. A circular RNA-gawky-chromatin regulatory axis modulates stress-induced transcription. Su R, et al. Nucleic Acids Res, 2024 Apr 24. PMID 38416578, Free PMC Article
  3. Genetic analysis of RpL38 and RpL5, two minute genes located in the centric heterochromatin of chromosome 2 of Drosophila melanogaster. Marygold SJ, et al. Genetics, 2005 Feb. PMID 15520262, Free PMC Article
  4. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
  5. The paradox of functional heterochromatin. Dimitri P, et al. Bioessays, 2005 Jan. PMID 15612038

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17715-PA
CG17715-PB
CG17715-PC
CG17715-PD
CG17715-PE
CG17715-PF
CG17715-PG
CG17715-PH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    22844220..22854541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259206.2 → NP_001246135.1  uncharacterized protein Dmel_CG17715, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246135.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NDV5
    Conserved Domains (1) summary
    pfam10507
    Location:151 → 258
    DUF2453; Protein of unknown function (DUF2453)

  2. NM_001042945.3 → NP_001036410.1  uncharacterized protein Dmel_CG17715, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036410.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYF7
    Conserved Domains (1) summary
    pfam10507
    Location:151 → 258
    DUF2453; Protein of unknown function (DUF2453)

  3. NM_001042943.3 → NP_001036408.1  uncharacterized protein Dmel_CG17715, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036408.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJR2
    Conserved Domains (1) summary
    pfam10507
    Location:110 → 217
    DUF2453; Protein of unknown function (DUF2453)

  4. NM_001042942.3 → NP_001036407.1  uncharacterized protein Dmel_CG17715, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036407.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJR0

  5. NM_001042944.3 → NP_001036409.1  uncharacterized protein Dmel_CG17715, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036409.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJR0

  6. NM_001042946.3 → NP_001036411.1  uncharacterized protein Dmel_CG17715, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036411.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYF7
    Conserved Domains (1) summary
    pfam10507
    Location:151 → 258
    DUF2453; Protein of unknown function (DUF2453)

  7. NM_001259207.2 → NP_001246136.1  uncharacterized protein Dmel_CG17715, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246136.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NFF0
    Conserved Domains (1) summary
    pfam10507
    Location:147 → 252
    DUF2453; Protein of unknown function (DUF2453)

  8. NM_001042947.3 → NP_001036412.1  uncharacterized protein Dmel_CG17715, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036412.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJR2
    Conserved Domains (1) summary
    pfam10507
    Location:110 → 217
    DUF2453; Protein of unknown function (DUF2453)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9NDV5 M9NDV5
M9NFF0 M9NFF0
Q5LJR0 Q5LJR0
Q5LJR2 Q5LJR2
Q8SYF7 Q8SYF7

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