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IFT57 Intraflagellar transport 57 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33579, updated on 4-Jan-2025

Summary

Official Symbol
IFT57provided by FlyBase
Official Full Name
Intraflagellar transport 57provided by FlyBase
Primary source
FLYBASE:FBgn0031550
Locus tag
Dmel_CG8853
See related
AllianceGenome:FB:FBgn0031550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8853; che-13; Che-13; CHE-13; Dmel\CG8853; Hippi; IFT55
Summary
Predicted to be involved in several processes, including apoptotic process; cilium organization; and positive regulation of cysteine-type endopeptidase activity. Predicted to be located in ciliary basal body. Predicted to be part of intraciliary transport particle B. Predicted to be active in Golgi apparatus; cilium; and microtubule organizing center. Is expressed in spermatozoon. Human ortholog(s) of this gene implicated in orofaciodigital syndrome XVIII. Orthologous to human IFT57 (intraflagellar transport 57). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See IFT57 in Genome Data Viewer
Location:
24A1-24A1; 2-10 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3530789..3532678)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3530789..3532678)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Scavenger receptor class C, type IV Neighboring gene uncharacterized protein Neighboring gene spindly Neighboring gene long non-coding RNA:CR44308 Neighboring gene drumstick

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cilium assembly ISM
Inferred from Sequence Model
more info
PubMed 
involved_in cilium assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in intraciliary transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in non-motile cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cysteine-type endopeptidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in ciliary basal body ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cilium ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of intraciliary transport particle B IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of intraciliary transport particle B ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in microtubule organizing center IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
intraflagellar transport 57
Names
CG8853-PA
Che-13 ortholog
IFT57-PA
hippi

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    3530789..3532678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134948.2NP_608792.1  intraflagellar transport 57 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608792.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W4R8, Q9VQS5, S5MIX7
    Related
    FBpp0077218
    Conserved Domains (1) summary
    pfam10498
    Location:29384
    IFT57; Intra-flagellar transport protein 57