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qrich1 glutamine-rich 1 [ Danio rerio (zebrafish) ]

Gene ID: 336260, updated on 4-Jan-2025

Summary

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Official Symbol
qrich1provided by ZNC
Official Full Name
glutamine-rich 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-8204
See related
Ensembl:ENSDARG00000019797 AllianceGenome:ZFIN:ZDB-GENE-030131-8204
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj59h09; wu:fj59h09; zgc:110077
Summary
Orthologous to human QRICH1 (glutamine rich 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See qrich1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (17997401..18017793, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (17862766..17883158, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene si:ch211-14i3.2 Neighboring gene cytokine inducible SH2-containing protein b Neighboring gene twinfilin actin-binding protein 2b Neighboring gene RNA pseudouridine synthase D4 Neighboring gene uncharacterized LOC110440097 Neighboring gene uncharacterized LOC137496689

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC110077

General protein information

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Preferred Names
glutamine-rich protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025462.1 → NP_001020633.1  glutamine-rich protein 1

    See identical proteins and their annotated locations for NP_001020633.1

    Status: PROVISIONAL

    Source sequence(s)
    BC096791
    UniProtKB/TrEMBL
    A0A8M1N6W3, Q4V9P2
    Related
    ENSDARP00000040170.4, ENSDART00000040171.7
    Conserved Domains (1) summary
    pfam12012
    Location:541 → 699
    DUF3504; Domain of unknown function (DUF3504)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    17997401..18017793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009305927.4 → XP_009304202.1  glutamine-rich protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009304202.1

    UniProtKB/TrEMBL
    A0A8M1N6W3, Q4V9P2
    Conserved Domains (1) summary
    pfam12012
    Location:541 → 699
    DUF3504; Domain of unknown function (DUF3504)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394813.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    382941..405459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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