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STC1 stanniocalcin 1 [ Bos taurus (domestic cattle) ]

Gene ID: 338078, updated on 27-Dec-2024

Summary

Official Symbol
STC1provided by VGNC
Official Full Name
stanniocalcin 1provided by VGNC
Primary source
VGNC:VGNC:35377
See related
BGD:BT19975; Ensembl:ENSBTAG00000001687
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See STC1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (70977493..70990673, complement)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene NK2 homeobox 6 Neighboring gene microRNA mir-2285aj Neighboring gene uncharacterized LOC132345973 Neighboring gene uncharacterized LOC132345974

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Expression

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

Pathways from PubChem

General gene information

Clone Names

  • MGC128640

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
stanniocalcin-1
Names
STC-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_176669.3NP_788842.2  stanniocalcin-1 precursor

    See identical proteins and their annotated locations for NP_788842.2

    Status: PROVISIONAL

    Source sequence(s)
    BC105435
    UniProtKB/Swiss-Prot
    A5D9D9, Q2KJA8, Q9N0T1
    Related
    ENSBTAP00000002200.3, ENSBTAT00000002200.4
    Conserved Domains (1) summary
    pfam03298
    Location:6206
    Stanniocalcin; Stanniocalcin family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    70977493..70990673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)