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psd palisade [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33830, updated on 4-Jan-2025

Summary

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Official Symbol
psdprovided by FlyBase
Official Full Name
palisadeprovided by FlyBase
Primary source
FLYBASE:FBgn0086265
Locus tag
Dmel_CG9050
See related
AllianceGenome:FB:FBgn0086265
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:GM32356; CG9050; Dmel\CG9050; Fcp26Aa; TU-1
Summary
Involved in follicle cell microvillus organization and vitelline membrane formation involved in chorion-containing eggshell formation. Located in egg chorion and vitelline envelope. Is expressed in centripetal follicle cell; egg chamber; and oocyte. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See psd in Genome Data Viewer
Location:
26A4-26A4; 2-18 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5963087..5964951, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5963087..5964951, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vitelline membrane 26Aac Neighboring gene Vitelline membrane 26Aa Neighboring gene uncharacterized protein Neighboring gene Uncoupling protein 4C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organization and expression of a second chromosome follicle cell gene cluster in Drosophila. Popodi E, et al. Dev Biol, 1988 Jun. PMID 3132408
  2. Palisade is required in the Drosophila ovary for assembly and function of the protective vitelline membrane. Elalayli M, et al. Dev Biol, 2008 Jul 15. PMID 18514182, Free PMC Article
  3. chickadee encodes a profilin required for intercellular cytoplasm transport during Drosophila oogenesis. Cooley L, et al. Cell, 1992 Apr 3. PMID 1339308
  4. Sulfation of eggshell components by Pipe defines dorsal-ventral polarity in the Drosophila embryo. Zhang Z, et al. Curr Biol, 2009 Jul 28. PMID 19540119, Free PMC Article
  5. Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, et al. Cells, 2020 Jan 30. PMID 32019091, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in follicle cell microvillus organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in vitelline membrane formation involved in chorion-containing eggshell formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in egg chorion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in vitelline envelope IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
palisade
Names
CG9050-PA
CG9050-PB
follicle cell protein 26Aa
psd-PA
psd-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    5963087..5964951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135130.3 → NP_608974.2  palisade, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608974.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IH21, Q9VMK3
    Related
    FBpp0078868

  2. NM_001273187.1 → NP_001260116.1  palisade, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260116.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IH21, Q9VMK3
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IH21 Q8IH21
Q9VMK3 Q9VMK3

Gene LinkOut

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