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Bathy01g01590 RNA polymerase II second largest subunit (Partial) [ Bathycoccus prasinos ]

Gene ID: 33867695, updated on 16-Nov-2023

Summary

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Gene symbol
Bathy01g01590
Gene description
RNA polymerase II second largest subunit (Partial)
Locus tag
Bathy01g01590
Gene type
protein coding
RNA name
RNA polymerase II second largest subunit (Partial)
RefSeq status
PROVISIONAL
Organism
Bathycoccus prasinos (strain: RCC 1105)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
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Genomic context

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See Bathy01g01590 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_024008.1 (293167..294514)

Chromosome 1 - NC_024008.1Genomic Context describing neighboring genes Neighboring gene putative nucleic acid binding protein (ISS) Neighboring gene FAD dependent oxidoreductase Neighboring gene predicted protein (Partial) Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024008.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
RNA polymerase II second largest subunit (Partial)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024008.1 Reference assembly

    Range
    293167..294514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022379227.1 → XP_022234913.1  RNA polymerase II second largest subunit (Partial), partial [Bathycoccus prasinos]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8EA85
    Conserved Domains (1) summary
    cl27130
    Location:32 → 300
    RNA_pol_Rpb2_1; RNA polymerase beta subunit
Nucleotide Protein
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