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PRSS38 serine protease 38 [ Homo sapiens (human) ]

Gene ID: 339501, updated on 10-Dec-2024

Summary

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Official Symbol
PRSS38provided by HGNC
Official Full Name
serine protease 38provided by HGNC
Primary source
HGNC:HGNC:29625
See related
Ensembl:ENSG00000185888 AllianceGenome:HGNC:29625
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MPN2
Summary
Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward testis (RPKM 1.8) See more
Orthologs
mouse all
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Genomic context

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See PRSS38 in Genome Data Viewer
Location:
1q42.13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (227815675..227846470)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (227004591..227035389)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (228003376..228034171)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1899 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1900 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227928395-227928940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227928941-227929485 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:227929473-227929676 Neighboring gene synaptosome associated protein 47 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:227937705-227938206 Neighboring gene jumonji domain containing 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2681 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2682 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2683 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:227949169-227949919 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2684 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2685 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:227952921-227953670 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227953671-227954420 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227961766-227962583 Neighboring gene MPRA-validated peak747 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227965808-227966590 Neighboring gene uncharacterized LOC105373289 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1901 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1902 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227980229-227980892 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:227981557-227982220 Neighboring gene MPRA-validated peak748 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228073527-228074122 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228074123-228074719 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228083643-228084489 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228087252-228087752 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228088986-228089986 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:228101825-228101974 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228102681-228103478 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228103479-228104275 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228107156-228108019 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228108020-228108882 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228114017-228114769 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228117534-228118094 Neighboring gene negCOR silencer S7 Neighboring gene Wnt family member 9A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228129831-228130733 Neighboring gene uncharacterized LOC124904533 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1903 Neighboring gene microRNA 5008

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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Related articles in PubMed

  1. Human and mouse proteases: a comparative genomic approach. Puente XS, et al. Nat Rev Genet, 2003 Jul. PMID 12838346
  2. FIH Regulates Cellular Metabolism through Hydroxylation of the Deubiquitinase OTUB1. Scholz CC, et al. PLoS Biol, 2016 Jan. PMID 26752685, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC163272

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables serine-type endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in proteolysis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine protease 38
Names
marapsin 2
protease, serine 38
serine protease MPN2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374657.2 → NP_001361586.1  serine protease 38 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AL356323, AL731702
    Conserved Domains (1) summary
    cd00190
    Location:60 → 197
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  2. NM_183062.3 → NP_898885.1  serine protease 38 isoform 1 precursor

    See identical proteins and their annotated locations for NP_898885.1

    Status: VALIDATED

    Source sequence(s)
    AL356323, AL731702
    Consensus CDS
    CCDS1563.1
    UniProtKB/Swiss-Prot
    A1L453, Q7RTY6
    Related
    ENSP00000355719.3, ENST00000366757.4
    Conserved Domains (1) summary
    cd00190
    Location:60 → 291
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    227815675..227846470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011544175.3 → XP_011542477.1  serine protease 38 isoform X1

    Conserved Domains (2) summary
    smart00020
    Location:59 → 192
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:60 → 192
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    227004591..227035389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054336279.1 → XP_054192254.1  serine protease 38 isoform X1

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1L453.2 GenPept UniProtKB/Swiss-Prot:A1L453

Gene LinkOut

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