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IGKV1OR2-118 immunoglobulin kappa variable 1/OR2-118 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 339562, updated on 10-Dec-2024

Summary

Official Symbol
IGKV1OR2-118provided by HGNC
Official Full Name
immunoglobulin kappa variable 1/OR2-118 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:37488
See related
IMGT/GENE-DB:IGKV1/OR2-118; AllianceGenome:HGNC:37488
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See IGKV1OR2-118 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90315092..90316061, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90925764..90926733, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90457976..90458945)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:90527913-90528424 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90519311-90519810 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:90518809-90519310 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90480262-90481249 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90481250-90482236 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90482237-90483224 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90484749-90485520 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90485521-90486290 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90476879-90477408 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90475288-90476036 Neighboring gene uncharacterized LOC101926946 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90470323-90470902 Neighboring gene translation initiation factor IF-2-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:90413141-90413640 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:90412639-90413140 Neighboring gene immunoglobulin kappa variable 3D-7 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:90392358-90392919 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90394129-90394691 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:90392920-90393482 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90391233-90391794 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:90390109-90390670 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:90389546-90390108 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90388985-90389545 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90387860-90388421 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90387297-90387859 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90385611-90386172 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:90384511-90385021 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:91602891-91603394 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:91604405-91604910 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:91604911-91605414 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91598401-91599190 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91597611-91598400 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91596821-91597610 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:90374628-90375319 Neighboring gene uncharacterized protein FLJ46347-like

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011659.2 

    Range
    101..1070
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    90315092..90316061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187524.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    86462..87431
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    90925764..90926733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)