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CG13775 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33975, updated on 4-Jan-2025

Summary

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Official Symbol
CG13775provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031874
Locus tag
Dmel_CG13775
See related
AllianceGenome:FB:FBgn0031874
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13775
Summary
Predicted to enable DNA binding activity and protein dimerization activity. Is expressed in organism. Orthologous to several human genes including ZBED4 (zinc finger BED-type containing 4). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG13775 in Genome Data Viewer
Location:
27C7-27C7; 2-23 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6954357..6956950, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6954357..6956950, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene interference hedgehog Neighboring gene Gas41 Neighboring gene Stromalin 1 Neighboring gene uncharacterized protein Neighboring gene Ada2a-containing complex component 1 Neighboring gene 3-Hydroxymethyl-3-methylglutaryl-CoA lyase Neighboring gene septin interacting protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The BED finger, a novel DNA-binding domain in chromatin-boundary-element-binding proteins and transposases. Aravind L. Trends Biochem Sci, 2000 Sep. PMID 10973053
  2. Genetic circuitry of Survival motor neuron, the gene underlying spinal muscular atrophy. Sen A, et al. Proc Natl Acad Sci U S A, 2013 Jun 25. PMID 23757500, Free PMC Article
  3. Modeling spinal muscular atrophy in Drosophila. Chang HC, et al. PLoS One, 2008 Sep 15. PMID 18791638, Free PMC Article
  4. A misexpression screen to identify regulators of Drosophila larval hemocyte development. Stofanko M, et al. Genetics, 2008 Sep. PMID 18757933, Free PMC Article
  5. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13775-PA
CG13775-PB
CG13775-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    6954357..6956950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298765.1 → NP_001285694.1  uncharacterized protein Dmel_CG13775, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285694.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D8FT38, Q9VM61
    Conserved Domains (2) summary
    pfam02892
    Location:6 → 48
    zf-BED; BED zinc finger
    pfam05699
    Location:525 → 603
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region

  2. NM_135243.2 → NP_609087.1  uncharacterized protein Dmel_CG13775, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609087.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D8FT38, Q9VM61
    Related
    FBpp0078991
    Conserved Domains (2) summary
    pfam02892
    Location:6 → 48
    zf-BED; BED zinc finger
    pfam05699
    Location:525 → 603
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region

  3. NM_001298766.1 → NP_001285695.1  uncharacterized protein Dmel_CG13775, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285695.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JDF6
    Conserved Domains (1) summary
    pfam05699
    Location:416 → 494
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VM61 Q9VM61
X2JDF6 X2JDF6

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