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CG18088 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34219, updated on 9-Dec-2024

Summary

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Official Symbol
CG18088provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032082
Locus tag
Dmel_CG18088
See related
AllianceGenome:FB:FBgn0032082
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG18088; gi21430616; gi7297472
Summary
Is expressed in amnioserosa. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG18088 in Genome Data Viewer
Location:
29F6-29F6; 2-34 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8967535..8970627)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8967535..8970627)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene rolling stone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila MARF1 ensures proper oocyte maturation by regulating nanos expression. Kawaguchi S, et al. PLoS One, 2020. PMID 32243476, Free PMC Article
  2. A new domain family in the superfamily of alkaline phosphatases. Bhadra R, et al. In Silico Biol, 2005. PMID 16268782
  3. Whole genome screen reveals a novel relationship between Wolbachia levels and Drosophila host translation. Grobler Y, et al. PLoS Pathog, 2018 Nov. PMID 30422992, Free PMC Article
  4. The Female Post-Mating Response Requires Genes Expressed in the Secondary Cells of the Male Accessory Gland in Drosophila melanogaster. Sitnik JL, et al. Genetics, 2016 Mar. PMID 26746709, Free PMC Article
  5. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG18088-PA
CG18088-PB
CG18088-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    8967535..8970627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273343.1 → NP_001260272.1  uncharacterized protein Dmel_CG18088, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260272.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MS30, Q9VLG3
    Conserved Domains (2) summary
    pfam02995
    Location:84 → 577
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:207 → 489
    ALP_like; uncharacterized Alkaline phosphatase subfamily

  2. NM_135418.3 → NP_609262.1  uncharacterized protein Dmel_CG18088, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609262.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MS30, Q9VLG3
    Related
    FBpp0079360
    Conserved Domains (2) summary
    pfam02995
    Location:84 → 577
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:207 → 489
    ALP_like; uncharacterized Alkaline phosphatase subfamily

  3. NM_001273342.1 → NP_001260271.1  uncharacterized protein Dmel_CG18088, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260271.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MS30, Q9VLG3
    Conserved Domains (2) summary
    pfam02995
    Location:84 → 577
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:207 → 489
    ALP_like; uncharacterized Alkaline phosphatase subfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MS30 Q8MS30
Q9VLG3 Q9VLG3

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