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gcm glial cells missing [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34277, updated on 4-Jan-2025

Summary

Official Symbol
gcmprovided by FlyBase
Official Full Name
glial cells missingprovided by FlyBase
Primary source
FLYBASE:FBgn0014179
Locus tag
Dmel_CG12245
See related
AllianceGenome:FB:FBgn0014179
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12245; Dmel\CG12245; Gcm; GCM; GCM1; GCMa; glide; glide/gcm; l(2)N7-4; N7-4; ucc
Summary
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including neurogenesis; positive regulation of gliogenesis; and positive regulation of macromolecule biosynthetic process. Located in nucleus. Is expressed in several structures, including epithelium; glial cell; head epidermis primordium; lamina monopolar neurons; and neuroblasts. Used to study hypoparathyroidism and infertility. Human ortholog(s) of this gene implicated in familial isolated hypoparathyroidism and hyperparathyroidism. Orthologous to human GCM2 (glial cells missing transcription factor 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See gcm in Genome Data Viewer
Location:
30B12-30B12; 2-35 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9579498..9581745, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9579498..9581745, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44149 Neighboring gene brickwall Neighboring gene Mitochondrial trifunctional protein alpha subunit Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43621 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in dendrite morphogenesis TAS
Traceable Author Statement
more info
PubMed 
involved_in embryonic crystal cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in establishment of glial blood-brain barrier IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glial cell development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glial cell differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in glial cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glial cell differentiation TAS
Traceable Author Statement
more info
PubMed 
involved_in glial cell fate determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in gliogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in gliogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in gliogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in hemocyte development NAS
Non-traceable Author Statement
more info
PubMed 
involved_in hemocyte development TAS
Traceable Author Statement
more info
PubMed 
involved_in negative regulation of crystal cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in plasmatocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in plasmatocyte differentiation TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of gene expression IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of glial cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of glial cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in posterior head segmentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of hemocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of phagocytosis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in retinal ganglion cell axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
glial cells missing
Names
CG12245-PA
CG12245-PB
gcm-PA
gcm-PB
glia cells missing
glial cell deficient
glial cell missing
glial cells-missing
glide
glide glide2
upper class chordotonals

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9579498..9581745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273363.1NP_001260292.1  glial cells missing, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260292.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0AVW8, Q27403, Q9VLA5
    UniProtKB/TrEMBL
    M9PFC8
    Conserved Domains (1) summary
    pfam03615
    Location:47186
    GCM; GCM motif protein
  2. NM_057760.5NP_477108.1  glial cells missing, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477108.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0AVW8, Q27403, Q9VLA5
    UniProtKB/TrEMBL
    M9PFC8
    Related
    FBpp0079451
    Conserved Domains (1) summary
    pfam03615
    Location:47186
    GCM; GCM motif protein