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CG5850 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34327, updated on 4-Jan-2025

Summary

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Official Symbol
CG5850provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032172
Locus tag
Dmel_CG5850
See related
AllianceGenome:FB:FBgn0032172
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5850
Summary
Predicted to enable transmembrane transporter activity. Predicted to be active in membrane. Is expressed in several structures, including adult head; circulatory system primordium; embryonic/larval fat body; and head mesoderm. Orthologous to human TMEM184C (transmembrane protein 184C). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See CG5850 in Genome Data Viewer
Location:
30F2-30F2; 2-38 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9959248..9963949, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9959248..9963949, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44872 Neighboring gene antisense RNA:CR43683 Neighboring gene DNA replication-related element factor Neighboring gene Ribosomal protein L13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Metabolomic analysis of the selection response of Drosophila melanogaster to environmental stress: are there links to gene expression and phenotypic traits? Malmendal A, et al. Naturwissenschaften, 2013 May. PMID 23571708
  2. Anion-sensitive fluorophore identifies the Drosophila swell-activated chloride channel in a genome-wide RNA interference screen. Stotz SC, et al. PLoS One, 2012. PMID 23056495, Free PMC Article
  3. Chromatin profiling using targeted DNA adenine methyltransferase. van Steensel B, et al. Nat Genet, 2001 Mar. PMID 11242113
  4. Analyzing the function of a hox gene: an evolutionary approach. Michaut L, et al. Dev Growth Differ, 2011 Dec. PMID 22150153
  5. Hairy transcriptional repression targets and cofactor recruitment in Drosophila. Bianchi-Frias D, et al. PLoS Biol, 2004 Jul. PMID 15252443, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG5850-PA
CG5850-PC
CG5850-PD
CG5850-PE
CG5850-PF
CG5850-PG
CG5850-PH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9959248..9963949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259026.2 → NP_001245955.1  uncharacterized protein Dmel_CG5850, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245955.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960V9, Q9VL56
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  2. NM_001042885.3 → NP_001036350.2  uncharacterized protein Dmel_CG5850, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036350.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8R8
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  3. NM_001259027.2 → NP_001245956.1  uncharacterized protein Dmel_CG5850, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245956.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NEX9
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  4. NM_001259028.2 → NP_001245957.1  uncharacterized protein Dmel_CG5850, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245957.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9NCT0
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  5. NM_135490.4 → NP_609334.1  uncharacterized protein Dmel_CG5850, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609334.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960V9, Q9VL56
    Related
    FBpp0079486
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  6. NM_001273381.2 → NP_001260310.1  uncharacterized protein Dmel_CG5850, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260310.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PD30
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha

  7. NM_001382184.1 → NP_001369126.1  uncharacterized protein Dmel_CG5850, isoform H [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A6H2EIL3
    Conserved Domains (1) summary
    pfam03619
    Location:51 → 317
    Solute_trans_a; Organic solute transporter Ostalpha
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A6H2EIL3 A0A6H2EIL3
M9NCT0 M9NCT0
M9NEX9 M9NEX9
M9PD30 M9PD30
Q0E8R8 Q0E8R8
Q9VL56 Q9VL56

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