U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ABOM_012246 2-dioxygenase [ Aspergillus bombycis ]

Gene ID: 34455635, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
ABOM_012246
Gene description
2-dioxygenase
Locus tag
ABOM_012246
Gene type
protein coding
RNA name
catechol 1
RefSeq status
PROVISIONAL
Organism
Aspergillus bombycis (strain: NRRL26010)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ABOM_012246 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_019170323.1Genomic Context describing neighboring genes Neighboring gene tRNA splicing 2' phosphotransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019170323.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Draft Genome Sequence of an Aflatoxigenic Aspergillus Species, A. bombycis. Moore GG, et al. Genome Biol Evol, 2016 Dec 14. PMID 27664179, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catechol 1,2-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in catechol-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
2-dioxygenase
catechol 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_019170323.1 Reference assembly

    Range
    1481..1726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022539373.1 → XP_022382850.1  catechol 1, partial [Aspergillus bombycis]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1F7ZI54
    Conserved Domains (1) summary
    cl25389
    Location:8 → 82
    intradiol_dioxygenase; Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases