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CG4480 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34864, updated on 9-Dec-2024

Summary

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Official Symbol
CG4480provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032553
Locus tag
Dmel_CG4480
See related
AllianceGenome:FB:FBgn0032553
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4480
Summary
Predicted to be active in membrane. Is expressed in adult head; early elongation stage spermatid; primary spermatocyte; and secondary spermatocyte. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG4480 in Genome Data Viewer
Location:
35B6-35B6; 2-50 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14870371..14872022, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14870371..14872022, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45727 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distinct functions of Mst77F and protamines in nuclear shaping and chromatin condensation during Drosophila spermiogenesis. Rathke C, et al. Eur J Cell Biol, 2010 Apr. PMID 20138392
  2. Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila. Rathke C, et al. J Cell Sci, 2007 May 1. PMID 17452629
  3. Gene expression profiling implicates OXPHOS complexes in lifespan extension of flies over-expressing a small mitochondrial chaperone, Hsp22. Kim HJ, et al. Exp Gerontol, 2010 Aug. PMID 20036725
  4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG4480-PB
CG4480-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    14870371..14872022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001201885.1 → NP_001188814.1  uncharacterized protein Dmel_CG4480, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188814.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C0PTU1, C3KGJ9, Q9VJR3
    Conserved Domains (1) summary
    pfam04750
    Location:79 → 230
    Far-17a_AIG1; FAR-17a/AIG1-like protein

  2. NM_135883.2 → NP_609727.2  uncharacterized protein Dmel_CG4480, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609727.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    C0PTU1, C3KGJ9, Q9VJR3
    Conserved Domains (1) summary
    pfam04750
    Location:79 → 230
    Far-17a_AIG1; FAR-17a/AIG1-like protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VJR3 Q9VJR3

Gene LinkOut

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