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CG15262 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34901, updated on 4-Jan-2025

Summary

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Official Symbol
CG15262provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0028852
Locus tag
Dmel_CG15262
See related
AllianceGenome:FB:FBgn0028852
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BG:DS07851.5; Dmel\CG15262
Summary
Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening and regulation of stem cell population maintenance. Predicted to be part of CCR4-NOT core complex. Predicted to be active in P-body. Orthologous to human CNOT2 (CCR4-NOT transcription complex subunit 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG15262 in Genome Data Viewer
Location:
35D1-35D1; 2-51 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15297808..15299367)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15297808..15299367)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene male sterile (2) 35Ci Neighboring gene long non-coding RNA:CR43764 Neighboring gene no hitter Neighboring gene escargot

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Drosophila behavioral mutant, down and out (dao), is defective in an essential regulator of Erg potassium channels. Fergestad T, et al. Proc Natl Acad Sci U S A, 2010 Mar 23. PMID 20212103, Free PMC Article
  2. Argonaute2 and LaminB modulate gene expression by controlling chromatin topology. Nazer E, et al. PLoS Genet, 2018 Mar. PMID 29529026, Free PMC Article
  3. Genome-wide in vitro and in vivo RNAi screens reveal Fer3 to be an important regulator of kkv transcription in Drosophila. Yue X, et al. Insect Sci, 2022 Jun. PMID 34351065
  4. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article
  5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA poly(A) tail shortening IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of stem cell population maintenance IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of CCR4-NOT core complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of CCR4-NOT core complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in P-body IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15262-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    15297808..15299367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135906.3 → NP_609750.1  uncharacterized protein Dmel_CG15262 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609750.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHE5, Q9V3I9
    Related
    FBpp0080292
    Conserved Domains (1) summary
    pfam04153
    Location:294 → 414
    NOT2_3_5; NOT2 / NOT3 / NOT5 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9V3I9 Q9V3I9

Gene LinkOut

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