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beat-Ib beaten path Ib [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34939, updated on 9-Dec-2024

Summary

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Official Symbol
beat-Ibprovided by FlyBase
Official Full Name
beaten path Ibprovided by FlyBase
Primary source
FLYBASE:FBgn0028645
Locus tag
Dmel_CG7644
See related
AllianceGenome:FB:FBgn0028645
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE51929; beat Ib; beat-1b; beat-B; Beat-Ib; BG:DS00365.4; CG7644; CT23325; Dmel\CG7644
Summary
Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and motor neuron axon guidance. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See beat-Ib in Genome Data Viewer
Location:
35D6-35D7; 2-51 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15905134..15962435, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15905134..15962435, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44867 Neighboring gene long non-coding RNA:CR44868 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43803 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43412 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immunoglobulin superfamily beat-Ib mediates intestinal regeneration induced by reactive oxygen species in Drosophila. Nagai H, et al. Genes Cells, 2020 May. PMID 32080940
  2. Axon guidance genes modulate neurotoxicity of ALS-associated UBQLN2. Kim SH, et al. Elife, 2023 Apr 11. PMID 37039476, Free PMC Article
  3. Combining genome-wide methods to investigate the genetic complexity of courtship song variation in Drosophila melanogaster. Turner TL, et al. Mol Biol Evol, 2013 Sep. PMID 23777628, Free PMC Article
  4. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679
  5. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article

See all (37) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

mobile_element

  • Loc: c15923189-15922917 mobile_element_type = transposon:INE-1{}2841

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in motor neuron axon guidance IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
beaten path Ib
Names
CG7644-PA
CG7644-PB
beat-Ib-PA
beat-Ib-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    15905134..15962435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078855.4 → NP_523579.1  beaten path Ib, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523579.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MS18, Q9BMH0, Q9VJM9
    Related
    FBpp0080366
    Conserved Domains (1) summary
    cl11960
    Location:160 → 182
    Ig; Immunoglobulin domain

  2. NM_001169516.2 → NP_001162987.1  beaten path Ib, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001162987.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MS18, Q9BMH0, Q9VJM9
    Conserved Domains (1) summary
    cl11960
    Location:160 → 182
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MS18 Q8MS18
Q9VJM9 Q9VJM9

Gene LinkOut

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