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beat-IIIa beaten path IIIa [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35035, updated on 9-Dec-2024

Summary

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Official Symbol
beat-IIIaprovided by FlyBase
Official Full Name
beaten path IIIaprovided by FlyBase
Primary source
FLYBASE:FBgn0265607
Locus tag
Dmel_CG12621
See related
AllianceGenome:FB:FBgn0265607
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
beat IIIa; Beat-IIIa; CG12621; CG42757; Dmel\CG12621
Old locus tag
Dmel_CG42757
Summary
Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and motor neuron axon guidance. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See beat-IIIa in Genome Data Viewer
Location:
36C1-36C2; 2-53 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17131024..17173118)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (17131024..17173118)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45448 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Erroneous attribution of relevant transcription factor binding sites despite successful prediction of cis-regulatory modules. Halfon MS, et al. BMC Genomics, 2011 Nov 25. PMID 22115527, Free PMC Article
  2. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679
  3. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article
  4. The Drosophila gene disruption project: progress using transposons with distinctive site specificities. Bellen HJ, et al. Genetics, 2011 Jul. PMID 21515576, Free PMC Article
  5. The transcription factors islet and Lim3 combinatorially regulate ion channel gene expression. Wolfram V, et al. J Neurosci, 2014 Feb 12. PMID 24523544, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: 17167618-17167803 mobile_element_type = transposon:pogo{}393

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in motor neuron axon guidance IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
beaten path IIIa
Names
CG12621-PD
CG12621-PE
beat-IIIa-PD
beat-IIIa-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    17131024..17173118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135985.6 → NP_609829.5  beaten path IIIa, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609829.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MRJ2
    Conserved Domains (2) summary
    smart00410
    Location:88 → 182
    IG_like; Immunoglobulin like
    cl11960
    Location:87 → 183
    Ig; Immunoglobulin domain

  2. NM_001201899.2 → NP_001188828.1  beaten path IIIa, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188828.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MRJ2
    Conserved Domains (2) summary
    smart00410
    Location:88 → 182
    IG_like; Immunoglobulin like
    cl11960
    Location:87 → 183
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9MRJ2 M9MRJ2
Q95UI4 Q95UI4

Gene LinkOut

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