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robl37BC robl37BC [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35166, updated on 9-Dec-2024

Summary

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Official Symbol
robl37BCprovided by FlyBase
Official Full Name
robl37BCprovided by FlyBase
Primary source
FLYBASE:FBgn0028569
Locus tag
Dmel_CG15171
See related
AllianceGenome:FB:FBgn0028569
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG15171; Dmel\CG15171; Robl37BC
Summary
Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be part of cytoplasmic dynein complex. Predicted to be active in centrosome and cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See robl37BC in Genome Data Viewer
Location:
37B9-37B9; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19010866..19011532)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19010866..19011532)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Ribosomal protein L30 Neighboring gene long non-coding RNA:CR45292 Neighboring gene long non-coding RNA:CR44184

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Zhang YE, et al. Genome Res, 2010 Nov. PMID 20798392, Free PMC Article
  2. Identification of genetic modifiers of TDP-43 neurotoxicity in Drosophila. Zhan L, et al. PLoS One, 2013. PMID 23468938, Free PMC Article
  3. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Zhang YE, et al. Bioinformatics, 2011 Jul 1. PMID 21551137, Free PMC Article
  4. New levels of transcriptome complexity at upper thermal limits in wild Drosophila revealed by exon expression analysis. Telonis-Scott M, et al. Genetics, 2013 Nov. PMID 24002645, Free PMC Article
  5. Survey of the Ciliary Motility Machinery of Drosophila Sperm and Ciliated Mechanosensory Neurons Reveals Unexpected Cell-Type Specific Variations: A Model for Motile Ciliopathies. Zur Lage P, et al. Front Genet, 2019. PMID 30774648, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables dynein intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dynein intermediate chain binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in microtubule-based movement IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in microtubule-based movement ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytoplasmic dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of dynein complex ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
robl37BC
Names
CG15171-PA
robl37BC-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19010866..19011532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136087.3 → NP_609931.1  robl37BC [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609931.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0JQ29, Q9VJ18
    Related
    FBpp0080683
    Conserved Domains (1) summary
    pfam03259
    Location:7 → 95
    Robl_LC7; Roadblock/LC7 domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VJ18 Q9VJ18

Gene LinkOut

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