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ANK1 ankyrin 1 [ Bos taurus (domestic cattle) ]

Gene ID: 353108, updated on 1-Jan-2025

Summary

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Gene symbol
ANK1
Gene description
ankyrin 1
See related
Ensembl:ENSBTAG00000054394
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ANK1 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
47
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (36564496..36809755, complement)

Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene NK6 homeobox 3 Neighboring gene microRNA mir-486 Neighboring gene uncharacterized LOC104976783 Neighboring gene uncharacterized LOC132344066 Neighboring gene lysine acetyltransferase 6A Neighboring gene U6 spliceosomal RNA Neighboring gene adaptor related protein complex 3 subunit mu 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. Regulatory polymorphisms in the bovine Ankyrin 1 gene promoter are associated with tenderness and intramuscular fat content. Aslan O, et al. BMC Genet, 2010 Dec 15. PMID 21159195, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC155206

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin-1
Names
ankyrin 1, erythrocytic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    36564496..36809755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024986486.2 → XP_024842254.1  ankyrin-1 isoform X3

    Related
    ENSBTAP00000084800.1, ENSBTAT00000124152.1
    Conserved Domains (5) summary
    smart00218
    Location:951 → 1055
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:398 → 523
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd08805
    Location:1440 → 1523
    Death_ank1; Death domain of Ankyrin-1
    sd00045
    Location:700 → 731
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:338 → 391
    Ank_4; Ankyrin repeats (many copies)

  2. XM_010820357.4 → XP_010818659.1  ankyrin-1 isoform X8

    See identical proteins and their annotated locations for XP_010818659.1

    UniProtKB/TrEMBL
    A0A3Q1N1N9
    Related
    ENSBTAP00000063016.1, ENSBTAT00000066510.2
    Conserved Domains (1) summary
    pfam12137
    Location:69 → 128
    RapA_C; RNA polymerase recycling family C-terminal

  3. XM_024986485.2 → XP_024842253.1  ankyrin-1 isoform X2

    Conserved Domains (5) summary
    smart00218
    Location:943 → 1047
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:398 → 523
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd08805
    Location:1432 → 1515
    Death_ank1; Death domain of Ankyrin-1
    sd00045
    Location:700 → 731
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:338 → 391
    Ank_4; Ankyrin repeats (many copies)

  4. XM_059882374.1 → XP_059738357.1  ankyrin-1 isoform X1

  5. XM_024986487.2 → XP_024842255.1  ankyrin-1 isoform X4

    Conserved Domains (5) summary
    smart00218
    Location:951 → 1055
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:398 → 523
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd08805
    Location:1440 → 1523
    Death_ank1; Death domain of Ankyrin-1
    sd00045
    Location:700 → 731
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:338 → 391
    Ank_4; Ankyrin repeats (many copies)

  6. XM_015460891.3 → XP_015316377.2  ankyrin-1 isoform X5

    Related
    ENSBTAP00000069149.2, ENSBTAT00000085365.2
    Conserved Domains (5) summary
    smart00218
    Location:922 → 1026
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:369 → 494
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd08805
    Location:1411 → 1494
    Death_ank1; Death domain of Ankyrin-1
    sd00045
    Location:671 → 702
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:309 → 362
    Ank_4; Ankyrin repeats (many copies)

  7. XM_015460892.3 → XP_015316378.1  ankyrin-1 isoform X9

    UniProtKB/TrEMBL
    A2VE25

  8. XM_010820356.4 → XP_010818658.1  ankyrin-1 isoform X7

    See identical proteins and their annotated locations for XP_010818658.1

    Conserved Domains (1) summary
    pfam12137
    Location:69 → 128
    RapA_C; RNA polymerase recycling family C-terminal

  9. XM_024986490.2 → XP_024842258.1  ankyrin-1 isoform X6

    Conserved Domains (5) summary
    smart00218
    Location:951 → 1055
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:398 → 523
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd08805
    Location:1440 → 1523
    Death_ank1; Death domain of Ankyrin-1
    sd00045
    Location:700 → 731
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:338 → 391
    Ank_4; Ankyrin repeats (many copies)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001104962.1: Suppressed sequence

    Description
    NM_001104962.1: This RefSeq was temporarily suppressed because the CDS was partial.
Nucleotide Protein Strain
Heading Accession and Version

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