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Zfp931 zinc finger protein 931 [ Mus musculus (house mouse) ]

Gene ID: 353208, updated on 27-Nov-2024

Summary

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Official Symbol
Zfp931provided by MGI
Official Full Name
zinc finger protein 931provided by MGI
Primary source
MGI:MGI:2441662
See related
Ensembl:ENSMUSG00000078861 AllianceGenome:MGI:2441662
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2810021G02Rik
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to several human genes including ZNF625 (zinc finger protein 625). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in bladder adult (RPKM 2.7), cerebellum adult (RPKM 2.3) and 23 other tissues See more
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Genomic context

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See Zfp931 in Genome Data Viewer
Location:
2 H4; 2 99.65 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (177708239..177721858, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (178066446..178078425, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_06697 Neighboring gene STARR-seq mESC enhancer starr_06698 Neighboring gene STARR-positive B cell enhancer ABC_E6035 Neighboring gene STARR-positive B cell enhancer mm9_chr2:177757807-177758108 Neighboring gene predicted gene, 40030 Neighboring gene zinc finger protein 971 Neighboring gene STARR-positive B cell enhancer mm9_chr2:177792959-177793260 Neighboring gene STARR-seq mESC enhancer starr_06699 Neighboring gene phosphatase and actin regulator 3 Neighboring gene synaptonemal complex protein 2 Neighboring gene GC-rich promoter binding protein 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis of H4K5 acetylation associated with fear memory in mice. Park CS, et al. BMC Genomics, 2013 Aug 8. PMID 23927422, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sequence-specific double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC353208
Names
novel KRAB box and zinc finger, C2H2 type domain containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001162922.1 → NP_001156394.1  uncharacterized protein LOC353208

    See identical proteins and their annotated locations for NP_001156394.1

    Status: VALIDATED

    Source sequence(s)
    AL731783
    Consensus CDS
    CCDS50836.1
    UniProtKB/TrEMBL
    A2AHM2
    Related
    ENSMUSP00000104552.3, ENSMUST00000108924.9
    Conserved Domains (3) summary
    COG5048
    Location:129 → 290
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:161 → 181
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    177708239..177721858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036162339.1 → XP_036018232.1  uncharacterized protein LOC353208 isoform X1

    UniProtKB/TrEMBL
    A2AHM2
    Conserved Domains (3) summary
    COG5048
    Location:129 → 290
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:161 → 181
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box

  2. XM_036162340.1 → XP_036018233.1  uncharacterized protein LOC353208 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:97 → 258
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:129 → 149
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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