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tshba thyroid stimulating hormone subunit beta a [ Danio rerio (zebrafish) ]

Gene ID: 353223, updated on 26-Jan-2025

Summary

Official Symbol
tshbaprovided by ZNC
Official Full Name
thyroid stimulating hormone subunit beta aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030513-3
See related
Ensembl:ENSDARG00000033726 AllianceGenome:ZFIN:ZDB-GENE-030513-3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
tshb
Summary
Predicted to enable hormone activity. Acts upstream of or within development of secondary sexual characteristics and regulation of thyroid hormone generation. Predicted to be located in extracellular region. Is expressed in adenohypophyseal placode; head; hypophysis; and thyroid follicle. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 4 and hypothyroidism. Orthologous to human TSHB (thyroid stimulating hormone subunit beta). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See tshba in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (49081177..49085288)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (49082524..49086635)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene si:ch211-105j21.9 Neighboring gene synaptonemal complex protein 1 Neighboring gene solute carrier family 5 member 8, like Neighboring gene solute carrier family 25 member 55a Neighboring gene tetraspanin 2a Neighboring gene uncharacterized LOC137496020

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
thyroid stimulating hormone subunit beta a
Names
thyroid stimulating hormone, beta subunit, a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181494.2NP_852471.1  thyroid stimulating hormone subunit beta a precursor

    See identical proteins and their annotated locations for NP_852471.1

    Status: PROVISIONAL

    Source sequence(s)
    AY135147
    UniProtKB/TrEMBL
    A0A8M9PZI4, Q801K4
    Related
    ENSDARP00000049999.2, ENSDART00000050000.3
    Conserved Domains (1) summary
    smart00068
    Location:17126
    GHB; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    49081177..49085288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394668.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    182019..186128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)