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CG31678 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35327, updated on 9-Dec-2024

Summary

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Official Symbol
CG31678provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051678
Locus tag
Dmel_CG31678
See related
AllianceGenome:FB:FBgn0051678
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
38D.30; CG17465; CG17466; Dmel\CG31678
Summary
Predicted to be located in rough endoplasmic reticulum. Predicted to be active in cytoplasm and membrane. Is expressed in adult head. Orthologous to human SUCO (SUN domain containing ossification factor). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31678 in Genome Data Viewer
Location:
38D2-38D4; 2-54 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20659132..20675941, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20659132..20675941, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene brunelleschi Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45004 Neighboring gene I-kappaB kinase epsilon Neighboring gene Centrocortin Neighboring gene uncharacterized protein Neighboring gene Hormone receptor-like in 38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular Basis for Cephalic Mechanosensitivity of Drosophila Larvae. Zhang Z, et al. Neurosci Bull, 2020 Sep. PMID 32761438, Free PMC Article
  2. Widespread Rewiring of Genetic Networks upon Cancer Signaling Pathway Activation. Billmann M, et al. Cell Syst, 2018 Jan 24. PMID 29199019, Free PMC Article
  3. The genomic response to courtship song stimulation in female Drosophila melanogaster. Immonen E, et al. Proc Biol Sci, 2012 Apr 7. PMID 21976688, Free PMC Article
  4. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
  5. The evolution of constitutively active humoral immune defenses in Drosophila populations under high parasite pressure. Zhou SO, et al. PLoS Pathog, 2024 Jan. PMID 38206983, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in rough endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31678-PB
CG31678-PC
CG31678-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    20659132..20675941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165336.3 → NP_724277.2  uncharacterized protein Dmel_CG31678, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724277.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YU09, Q9VIK7
    Conserved Domains (1) summary
    pfam07738
    Location:409 → 532
    Sad1_UNC; Sad1 / UNC-like C-terminal

  2. NM_001144372.2 → NP_001137844.1  uncharacterized protein Dmel_CG31678, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137844.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZY0
    Conserved Domains (1) summary
    pfam07738
    Location:244 → 367
    Sad1_UNC; Sad1 / UNC-like C-terminal

  3. NM_001299177.1 → NP_001286106.1  uncharacterized protein Dmel_CG31678, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286106.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7YZY0
    Conserved Domains (1) summary
    pfam07738
    Location:244 → 367
    Sad1_UNC; Sad1 / UNC-like C-terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B7YZY0 B7YZY0
Q8T3X4 Q8T3X4
Q9VIK7 Q9VIK7

Gene LinkOut

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