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Y48G1C.8 OTU domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 3564797, updated on 18-Sep-2024

Summary

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Official Symbol
Y48G1C.8
Official Full Name
OTU domain-containing protein
Primary source
WormBase:WBGene00021681
Locus tag
CELE_Y48G1C.8
See related
AllianceGenome:WB:WBGene00021681
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Y48G1C.8 in Genome Data Viewer
Location:
chromosome: I
Exon count:
14
Sequence:
Chromosome: I; NC_003279.8 (96459..108223, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sm domain-containing protein Neighboring gene Protein pid-2 Neighboring gene Chitin-binding type-2 domain-containing protein Neighboring gene Ras-related protein rab-11.1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
OTU domain-containing protein
NP_001293167.1
  • Confirmed by transcript evidence
NP_001293168.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    96459..108223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001306238.2 → NP_001293167.1  OTU domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293167.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CL97

  2. NM_001306239.4 → NP_001293168.1  OTU domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293168.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CL71
Nucleotide Protein
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