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R10E11.6 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 3565637, updated on 9-Dec-2024

Summary

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Official Symbol
R10E11.6
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00011218
Locus tag
CELE_R10E11.6
See related
AllianceGenome:WB:WBGene00011218
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to human SYNRG (synergin gamma). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See R10E11.6 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (9783325..9786045)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase 16 kDa proteolipid subunit c 1 Neighboring gene V-type proton ATPase 16 kDa proteolipid subunit c 3 Neighboring gene Apolipoprotein A1/A4/E domain protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene DNA replication licensing factor mcm-6 Neighboring gene Serpentine receptor class XA 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Uncharacterized protein
NP_001040862.1
  • Confirmed by transcript evidence
NP_001040863.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    9783325..9786045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047397.6 → NP_001040862.1  Uncharacterized protein CELE_R10E11.6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040862.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34550, Q2EEP4, Q2EEP5
    Conserved Domains (1) summary
    cd00052
    Location:72 → 118
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

  2. NM_001047398.6 → NP_001040863.1  Uncharacterized protein CELE_R10E11.6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040863.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34550
    Conserved Domains (1) summary
    cd00052
    Location:72 → 118
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34550.2

Gene LinkOut

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