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Y87G2A.16 Carbohydrate sulfotransferase [ Caenorhabditis elegans ]

Gene ID: 3565642, updated on 9-Dec-2024

Summary

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Official Symbol
Y87G2A.16
Official Full Name
Carbohydrate sulfotransferase
Primary source
WormBase:WBGene00013602
Locus tag
CELE_Y87G2A.16
See related
AllianceGenome:WB:WBGene00013602
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y87G2A.16 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (13560091..13563465)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene small monomeric GTPase Neighboring gene Valine--tRNA ligase Neighboring gene Ground-like domain-containing protein Neighboring gene peptidylprolyl isomerase Neighboring gene Zc3h12a-like Ribonuclease NYN domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables chondroitin 4-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in positive regulation of response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Carbohydrate sulfotransferase
NP_001021832.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    13560091..13563465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026661.4 → NP_001021832.1  Carbohydrate sulfotransferase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021832.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YXB5
    Conserved Domains (1) summary
    pfam03567
    Location:112 → 351
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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