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ZC412.3 Abnormal cell migration protein 18-like fibronectin type I domain-containing protein;Sushi domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 3565691, updated on 4-Jan-2025

Summary

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Official Symbol
ZC412.3
Official Full Name
Abnormal cell migration protein 18-like fibronectin type I domain-containing protein;Sushi domain-containing protein
Primary source
WormBase:WBGene00013884
Locus tag
CELE_ZC412.3
See related
AllianceGenome:WB:WBGene00013884
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ZC412.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (14868516..14871547, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Receptor-type guanylate cyclase gcy-14 Neighboring gene ncRNA Neighboring gene UDENN domain-containing protein Neighboring gene DUF19 domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Phe

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
  2. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Abnormal cell migration protein 18-like fibronectin type I domain-containing protein;Sushi domain-containing protein
NP_001317886.1
  • Confirmed by transcript evidence
NP_506662.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    14868516..14871547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001330883.3 → NP_001317886.1  Abnormal cell migration protein 18-like fibronectin type I domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1C3NSL5

  2. NM_074261.7 → NP_506662.1  Sushi domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506662.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q23307
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q23307.1

Gene LinkOut

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