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Anapc10 anaphase promoting complex subunit 10 [ Rattus norvegicus (Norway rat) ]

Gene ID: 361389, updated on 9-Dec-2024

Summary

Official Symbol
Anapc10provided by RGD
Official Full Name
anaphase promoting complex subunit 10provided by RGD
Primary source
RGD:1308936
See related
EnsemblRapid:ENSRNOG00000018296 AllianceGenome:RGD:1308936
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in anaphase-promoting complex-dependent catabolic process and protein polyubiquitination. Predicted to be located in cytoplasm. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC10 (anaphase promoting complex subunit 10). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Thymus (RPKM 55.3), Lung (RPKM 41.1) and 9 other tissues See more
Orthologs
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Genomic context

See Anapc10 in Genome Data Viewer
Location:
19q11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (45057278..45109882, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (28152299..28205552, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (31814686..31867928, complement)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene Hedgehog-interacting protein Neighboring gene uncharacterized LOC134483635 Neighboring gene uncharacterized LOC102549584 Neighboring gene small nuclear ribonucleoprotein G pseudogene Neighboring gene ATP binding cassette subfamily E member 1 Neighboring gene OTU deubiquitinase 4

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
anaphase-promoting complex subunit 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108445.1NP_001101915.1  anaphase-promoting complex subunit 10

    See identical proteins and their annotated locations for NP_001101915.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473972
    UniProtKB/TrEMBL
    A6IYH7, B5DEP3, F7EP70
    Related
    ENSRNOP00000024689.4, ENSRNOT00000024689.7
    Conserved Domains (1) summary
    pfam03256
    Location:4183
    ANAPC10; Anaphase-promoting complex, subunit 10 (APC10)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    45057278..45109882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063278119.1XP_063134189.1  anaphase-promoting complex subunit 10 isoform X2

  2. XM_008772516.4XP_008770738.1  anaphase-promoting complex subunit 10 isoform X1

    Conserved Domains (1) summary
    cl02148
    Location:4110
    APC10-like; APC10-like DOC1 domains in E3 ubiquitin ligases that mediate substrate ubiquitination