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Cpr47Ef Cuticular protein 47Ef [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36194, updated on 9-Dec-2024

Summary

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Official Symbol
Cpr47Efprovided by FlyBase
Official Full Name
Cuticular protein 47Efprovided by FlyBase
Primary source
FLYBASE:FBgn0033603
Locus tag
Dmel_CG13214
See related
AllianceGenome:FB:FBgn0033603
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13214; DmelCpr47Ef; Dmel\CG13214
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be active in chitin-based extracellular matrix. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Cpr47Ef in Genome Data Viewer
Location:
47E4-47E5; 2-64 cM
Exon count:
17
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11266915..11272575, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7154420..7160080, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Cuticular protein 47Ed Neighboring gene Cuticular protein 47Ee Neighboring gene Troponin C at 47D Neighboring gene Cuticular protein 47Eg

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
is_active_in chitin-based extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
cuticular protein 47Ef
Names
CG13214-PC
CG13214-PD
Cpr47Ef-PC
Cpr47Ef-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    11266915..11272575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001201976.2 → NP_001188905.1  cuticular protein 47Ef, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188905.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4JCR2
    Conserved Domains (1) summary
    pfam00379
    Location:149 → 204
    Chitin_bind_4; Insect cuticle protein

  2. NM_136816.3 → NP_610660.2  cuticular protein 47Ef, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610660.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8H7
    Conserved Domains (1) summary
    pfam00379
    Location:149 → 204
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4JCR2 A0A0B4JCR2
A1Z8H7 A1Z8H7

Gene LinkOut

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