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CG13204 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36227, updated on 4-Jan-2025

Summary

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Official Symbol
CG13204provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033627
Locus tag
Dmel_CG13204
See related
AllianceGenome:FB:FBgn0033627
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
13204; Dmel\CG13204
Summary
Predicted to enable DNA binding activity. Is expressed in germline cell; insulin secreting cell of pars intercerebralis; larval nervous system; and larval ventral nerve cord. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See CG13204 in Genome Data Viewer
Location:
47F6-47F7; 2-64 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11366710..11370287)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7254215..7257792)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene separation anxiety Neighboring gene Gustatory receptor 47b Neighboring gene Translocon-associated protein delta Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and characterization of new alleles of quiver (qvr) that encodes an extracellular modulator of the Shaker potassium channel. Ruan H, et al. J Neurogenet, 2017 Dec. PMID 29117754, Free PMC Article
  2. Stonewall and Brickwall: Two Partially Redundant Determinants Required for the Maintenance of Female Germline in Drosophila. Shukla V, et al. G3 (Bethesda), 2018 May 31. PMID 29669801, Free PMC Article
  3. The MADF-BESS domain factor Dip3 potentiates synergistic activation by Dorsal and Twist. Bhaskar V, et al. Gene, 2002 Oct 16. PMID 12459265
  4. Gene duplication, lineage-specific expansion, and subfunctionalization in the MADF-BESS family patterns the Drosophila wing hinge. Shukla V, et al. Genetics, 2014 Feb. PMID 24336749, Free PMC Article
  5. Network analyses reveal novel aspects of ALS pathogenesis. Sanhueza M, et al. PLoS Genet, 2015 Mar. PMID 25826266, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG13204-PA
CG13204-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    11366710..11370287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136834.2 → NP_610678.1  uncharacterized protein Dmel_CG13204, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610678.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z8K2, Q7YU31
    Related
    FBpp0087229
    Conserved Domains (2) summary
    smart00595
    Location:22 → 108
    MADF; subfamily of SANT domain
    pfam02944
    Location:478 → 510
    BESS; BESS motif

  2. NM_165827.2 → NP_725042.1  uncharacterized protein Dmel_CG13204, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725042.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6NNF8, Q7YU31
    Related
    FBpp0087230
    Conserved Domains (1) summary
    pfam02944
    Location:377 → 409
    BESS; BESS motif
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z8K2 A1Z8K2
Q6NNF8 Q6NNF8
Q7YU31 Q7YU31

Gene LinkOut

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