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Pate4 prostate and testis expressed 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 363041, discontinued on 30-Jul-2024

Summary

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Official Symbol
Pate4provided by RGD
Official Full Name
prostate and testis expressed 4provided by RGD
Primary source
RGD:1311172
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Svs7; Pate4a
Expression
Biased expression in Testes (RPKM 6.9), Brain (RPKM 6.7) and 7 other tissues See more
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Genomic context

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See Pate4 in Genome Data Viewer
Location:
8q21
Exon count:
3
Annotation release Status Assembly Chr Location
108 latest, but not current mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (33988812..33991552, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (36815007..36817747, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Names
prostate and testis expressed 4
prostate and testis expressed 4A
prostate and testis expressed protein 4
seminal vesicle protein, secretion 7
seminal vesicle secretory protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051343.1 Reference mRatBN7.2 Primary Assembly

    Range
    33988812..33991552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001108757.1 → NP_001102227.1  

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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