U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rwdd2a RWD domain containing 2A [ Rattus norvegicus (Norway rat) ]

Gene ID: 363110, updated on 27-Nov-2024

Summary

Official Symbol
Rwdd2aprovided by RGD
Official Full Name
RWD domain containing 2Aprovided by RGD
Primary source
RGD:1306231
See related
EnsemblRapid:ENSRNOG00000009599 AllianceGenome:RGD:1306231
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rwdd2
Summary
Orthologous to human RWDD2A (RWD domain containing 2A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 49.2), Adrenal (RPKM 14.3) and 6 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Rwdd2a in Genome Data Viewer
Location:
8q31
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (96416190..96419315)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (87536153..87539301)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (94243318..94246496)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene DOP1 leucine zipper like protein A Neighboring gene phosphoglucomutase 3 Neighboring gene malic enzyme 1 Neighboring gene small nucleolar RNA SNORA17

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
RWD domain-containing protein 2A
Names
RWD domain containing 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108773.2NP_001102243.1  RWD domain-containing protein 2A

    See identical proteins and their annotated locations for NP_001102243.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000008
    UniProtKB/TrEMBL
    A6I1V0, D3ZAT3
    Related
    ENSRNOP00000012864.4, ENSRNOT00000012864.7
    Conserved Domains (2) summary
    pfam06544
    Location:160281
    DUF1115; Protein of unknown function (DUF1115)
    cl02687
    Location:15134
    RWD; RWD domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    96416190..96419315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039081762.2XP_038937690.1  RWD domain-containing protein 2A isoform X1

    UniProtKB/TrEMBL
    A6I1V0, D3ZAT3
    Conserved Domains (2) summary
    pfam06544
    Location:160281
    DUF1115; Protein of unknown function (DUF1115)
    cl02687
    Location:15134
    RWD; RWD domain
  2. XM_006243485.5XP_006243547.1  RWD domain-containing protein 2A isoform X1

    See identical proteins and their annotated locations for XP_006243547.1

    UniProtKB/TrEMBL
    A6I1V0, D3ZAT3
    Conserved Domains (2) summary
    pfam06544
    Location:160281
    DUF1115; Protein of unknown function (DUF1115)
    cl02687
    Location:15134
    RWD; RWD domain