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Rnf222 ring finger protein 222 [ Rattus norvegicus (Norway rat) ]

Gene ID: 363627, updated on 4-Jan-2025

Summary

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Official Symbol
Rnf222provided by RGD
Official Full Name
ring finger protein 222provided by RGD
Primary source
RGD:1310573
See related
EnsemblRapid:ENSRNOG00000022964 AllianceGenome:RGD:1310573
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1310573
Summary
Orthologous to human RNF222 (ring finger protein 222). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Testes (RPKM 12.3), Thymus (RPKM 12.0) and 2 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Rnf222 in Genome Data Viewer
Location:
10q24
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (54090219..54102161)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (53596751..53603305)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (55472794..55484850)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain 10 Neighboring gene large ribosomal subunit protein eL30-like Neighboring gene nudE neurodevelopment protein 1-like 1 Neighboring gene peroxiredoxin 6, pseudogene 1 Neighboring gene ribosomal protein L26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RING finger protein 222

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108828.1 → NP_001102298.1  RING finger protein 222

    See identical proteins and their annotated locations for NP_001102298.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473948
    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3
    Related
    ENSRNOP00000032127.3, ENSRNOT00000038454.5
    Conserved Domains (1) summary
    cd16564
    Location:13 → 65
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    54090219..54102161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008767847.4 → XP_008766069.1  RING finger protein 222 isoform X1

    See identical proteins and their annotated locations for XP_008766069.1

    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3
    Conserved Domains (1) summary
    cd16564
    Location:13 → 65
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins

  2. XM_063269511.1 → XP_063125581.1  RING finger protein 222 isoform X1

    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3

  3. XM_063269510.1 → XP_063125580.1  RING finger protein 222 isoform X1

    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3

  4. XM_063269512.1 → XP_063125582.1  RING finger protein 222 isoform X1

    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3
    Related
    ENSRNOP00000100816.1, ENSRNOT00000154956.1

  5. XM_063269513.1 → XP_063125583.1  RING finger protein 222 isoform X1

    UniProtKB/TrEMBL
    A6HFL3, D3ZTZ3
    Related
    ENSRNOP00000100987.1, ENSRNOT00000135124.1
Nucleotide Protein Strain
Heading Accession and Version

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