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s-cup stanley-cup [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36371, updated on 9-Dec-2024

Summary

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Official Symbol
s-cupprovided by FlyBase
Official Full Name
stanley-cupprovided by FlyBase
Primary source
FLYBASE:FBgn0050044
Locus tag
Dmel_CG30044
See related
AllianceGenome:FB:FBgn0050044
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13152; CG13153; CG30044; Dmel\CG30044
Summary
Is expressed in elongation stage spermatid and primary spermatocyte. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See s-cup in Genome Data Viewer
Location:
49A9-49A10; 2-67 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12495672..12501459)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8383177..8388964)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Neprilysin-like 10 Neighboring gene Diuretic hormone 44 receptor 2 Neighboring gene uncharacterized protein Neighboring gene fused lobes Neighboring gene vismay Neighboring gene achintya

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Requirement for two nearly identical TGIF-related homeobox genes in Drosophila spermatogenesis. Wang Z, et al. Development, 2003 Jul. PMID 12756170
  2. Drosophila TGIF is essential for developmentally regulated transcription in spermatogenesis. Ayyar S, et al. Development, 2003 Jul. PMID 12756169
  3. Post-meiotic transcription in Drosophila testes. Barreau C, et al. Development, 2008 Jun. PMID 18434411
  4. Genome-wide mapping of in vivo targets of the Drosophila transcription factor Kruppel. Matyash A, et al. J Biol Chem, 2004 Jul 16. PMID 15131112
  5. Variation in the response to exercise stimulation in Drosophila: marathon runner versus sprinter genotypes. Riddle NC. J Exp Biol, 2020 Sep 21. PMID 32737212

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
stanley-cup
Names
CG30044-PB
s-cup-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12495672..12501459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136948.3 → NP_610792.2  stanley-cup [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610792.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8DYB9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8DYB9 A8DYB9
Q8T3H7 Q8T3H7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
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