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CNN02110 chitin synthase, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 36393178, updated on 26-Jun-2024

Summary

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Gene symbol
CNN02110
Gene description
chitin synthase, putative
Locus tag
CNN02110
See related
FungiDB:CNN02110; VEuPathDB:CNN02110
Gene type
protein coding
RNA name
chitin synthase, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNN02110 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Sequence:
Chromosome: 14; NC_006683.1 (657213..659596)

Chromosome 14 - NC_006683.1Genomic Context describing neighboring genes Neighboring gene hexose transport-related protein, putative Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene adenosine kinase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006683.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006683.1 Reference assembly

    Range
    657213..659596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024658418.1 → XP_024514089.1  chitin synthase, putative [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5K6V8
    Conserved Domains (4) summary
    pfam01644
    Location:342 → 504
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:276 → 341
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:472 → 584
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl28087
    Location:45 → 172
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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