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mycbp2 MYC binding protein 2 [ Danio rerio (zebrafish) ]

Gene ID: 368439, updated on 4-Jan-2025

Summary

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Official Symbol
mycbp2provided by ZNC
Official Full Name
MYC binding protein 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-132
See related
Ensembl:ENSDARG00000001220 AllianceGenome:ZFIN:ZDB-GENE-030616-132
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
Myc; PAM; esr; til; esrom; tilsit; zft368; fa97c06; ns:zft368; xx:zft368; wu:fa97c06; si:dz12g7.1; si:dz256p4.1; si:busm1-12g7.1
Summary
Enables ubiquitin-protein transferase activity. Acts upstream of or within several processes, including axonogenesis; habenula development; and regulation of pteridine metabolic process. Located in cytoplasm. Is expressed in several structures, including eye; heart; integument; liver; and testis. Orthologous to human MYCBP2 (MYC binding protein 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
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Genomic context

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See mycbp2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
86
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (17045878..17286340, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (17038163..17278631, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490345 Neighboring gene F-box and leucine-rich repeat protein 3a Neighboring gene uncharacterized LOC137496462 Neighboring gene uncharacterized LOC137490765 Neighboring gene sciellin Neighboring gene SLAIN motif family, member 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Esrom, an ortholog of PAM (protein associated with c-myc), regulates pteridine synthesis in the zebrafish. Le Guyader S, et al. Dev Biol, 2005 Jan 15. PMID 15617681
  2. The ubiquitin ligase PHR promotes directional regrowth of spinal zebrafish axons. Bremer J, et al. Commun Biol, 2019. PMID 31149640, Free PMC Article
  3. Mutations affecting xanthophore pigmentation in the zebrafish, Danio rerio. Odenthal J, et al. Development, 1996 Dec. PMID 9007257
  4. Disruption of Esrom and Ryk identifies the roof plate boundary as an intermediate target for commissure formation. Hendricks M, et al. Mol Cell Neurosci, 2008 Feb. PMID 18060805
  5. PHR regulates growth cone pausing at intermediate targets through microtubule disassembly. Hendricks M, et al. J Neurosci, 2009 May 20. PMID 19458229, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PHR (Mycbp2) has a role in promoting directional regrowth of spinal zebrafish axons
    Title: The ubiquitin ligase PHR promotes directional regrowth of spinal zebrafish axons.
  2. These data identify Esrom as a mediator of growth cone navigation at an intermediate target and underscore the importance of midline boundaries as signaling centers for commissure formation.
    Title: Disruption of Esrom and Ryk identifies the roof plate boundary as an intermediate target for commissure formation.
  3. Esrom, an ortholog of PAM (protein associated with c-myc), regulates pteridine synthesis in the zebrafish.
    Title: Esrom, an ortholog of PAM (protein associated with c-myc), regulates pteridine synthesis in the zebrafish.
  4. Esrom has E3 ligase activity and modulates the amount of phosphorylated Tuberin in growth cones
    Title: Formation of the retinotectal projection requires Esrom, an ortholog of PAM (protein associated with Myc).
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
  
enables guanyl-nucleotide exchange factor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables small GTPase binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin protein ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ubiquitin protein ligase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables ubiquitin-protein transferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within axon choice point recognition IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within axon extension involved in regeneration IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within axon extension involved in regeneration IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in axon guidance IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within axon guidance IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in central nervous system projection neuron axonogenesis ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in circadian regulation of gene expression ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within developmental pigmentation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within habenula development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
  
involved_in neuromuscular process ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of axon guidance ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of pteridine metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of synaptic assembly at neuromuscular junction IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within retinal ganglion cell axon guidance IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within rhythmic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
  
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MYCBP2
Names
protein Esrom
NP_001012247.2
XP_009302823.1
XP_009302824.1
XP_009302825.1
XP_009302826.1
XP_009302827.1
XP_009302828.1
XP_009302829.1
XP_009302830.1
XP_009302831.1
XP_009302832.1
XP_009302833.1
XP_009302834.1
XP_009302835.1
XP_009302836.1
XP_009302837.1
XP_009302838.1
XP_017213145.1
XP_021334293.1
XP_068079420.1
XP_068079421.1
XP_068079422.1
XP_068079423.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012247.2 → NP_001012247.2  E3 ubiquitin-protein ligase MYCBP2

    Status: VALIDATED

    Source sequence(s)
    AL840634, BX510646, CR628366, CU138551
    UniProtKB/Swiss-Prot
    D3JU51, D3JU52, F1QI76, F1RD40, Q5IBM5, Q7ZZ57, Q8AW10
    Related
    ENSDARP00000028785.7, ENSDART00000039157.8
    Conserved Domains (6) summary
    pfam00415
    Location:943 → 991
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam08005
    Location:1221 → 1369
    PHR; PHR domain
    pfam13540
    Location:928 → 956
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    cd16463
    Location:4321 → 4375
    RING-H2_PHR; RING finger, H2 subclass, found in the PHR protein family
    cl27659
    Location:2377 → 2428
    Filamin; Filamin/ABP280 repeat
    cl27697
    Location:527 → 716
    RCC1; Regulator of chromosome condensation (RCC1) repeat

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    17045878..17286340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009304556.4 → XP_009302831.1  E3 ubiquitin-protein ligase MYCBP2 isoform X10

    UniProtKB/TrEMBL
    A0A8M3B5H4
    Conserved Domains (7) summary
    COG5184
    Location:615 → 974
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:908 → 956
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2341 → 2382
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1677 → 1834
    PHR; PHR domain
    pfam08239
    Location:2427 → 2487
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4474 → 4527
    zf-RING_2; Ring finger domain

  2. XM_009304550.4 → XP_009302825.1  E3 ubiquitin-protein ligase MYCBP2 isoform X3

    UniProtKB/TrEMBL
    A0A8M3AVV1
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1011
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:943 → 991
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2376 → 2417
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1712 → 1869
    PHR; PHR domain
    pfam08239
    Location:2462 → 2522
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4509 → 4562
    zf-RING_2; Ring finger domain

  3. XM_009304554.4 → XP_009302829.1  E3 ubiquitin-protein ligase MYCBP2 isoform X8

    UniProtKB/TrEMBL
    A0A8M3BCC8
    Conserved Domains (7) summary
    COG5184
    Location:615 → 982
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:916 → 964
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2349 → 2390
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1685 → 1842
    PHR; PHR domain
    pfam08239
    Location:2435 → 2495
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4482 → 4535
    zf-RING_2; Ring finger domain

  4. XM_068223322.1 → XP_068079423.1  E3 ubiquitin-protein ligase MYCBP2 isoform X22

  5. XM_009304562.4 → XP_009302837.1  E3 ubiquitin-protein ligase MYCBP2 isoform X17

    UniProtKB/TrEMBL
    A0A8M3B2K0
    Conserved Domains (6) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4406 → 4459
    zf-RING_2; Ring finger domain

  6. XM_068223321.1 → XP_068079422.1  E3 ubiquitin-protein ligase MYCBP2 isoform X21

  7. XM_009304560.4 → XP_009302835.1  E3 ubiquitin-protein ligase MYCBP2 isoform X15

    UniProtKB/TrEMBL
    A0A8M3AVW4
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4418 → 4471
    zf-RING_2; Ring finger domain

  8. XM_068223320.1 → XP_068079421.1  E3 ubiquitin-protein ligase MYCBP2 isoform X20

  9. XM_021478618.2 → XP_021334293.1  E3 ubiquitin-protein ligase MYCBP2 isoform X13

    UniProtKB/TrEMBL
    A0A8M9Q4H8
    Conserved Domains (6) summary
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam08005
    Location:1229 → 1377
    PHR; PHR domain
    pfam13540
    Location:936 → 964
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    cd16463
    Location:4455 → 4509
    RING-H2_PHR; RING finger, H2 subclass, found in the PHR protein family
    cl27659
    Location:2385 → 2436
    Filamin; Filamin/ABP280 repeat
    cl27697
    Location:527 → 716
    RCC1; Regulator of chromosome condensation (RCC1) repeat

  10. XM_009304563.4 → XP_009302838.1  E3 ubiquitin-protein ligase MYCBP2 isoform X18

    UniProtKB/TrEMBL
    A0A8M3AVW8
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4404 → 4457
    zf-RING_2; Ring finger domain

  11. XM_009304551.4 → XP_009302826.1  E3 ubiquitin-protein ligase MYCBP2 isoform X5

    UniProtKB/TrEMBL
    A0A8M3B5G8
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4492 → 4545
    zf-RING_2; Ring finger domain

  12. XM_068223319.1 → XP_068079420.1  E3 ubiquitin-protein ligase MYCBP2 isoform X19

  13. XM_009304555.4 → XP_009302830.1  E3 ubiquitin-protein ligase MYCBP2 isoform X9

    UniProtKB/TrEMBL
    A0A8M3AVV8
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4481 → 4534
    zf-RING_2; Ring finger domain

  14. XM_009304561.4 → XP_009302836.1  E3 ubiquitin-protein ligase MYCBP2 isoform X16

    UniProtKB/TrEMBL
    A0A8M3B5H8
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4416 → 4469
    zf-RING_2; Ring finger domain

  15. XM_009304559.4 → XP_009302834.1  E3 ubiquitin-protein ligase MYCBP2 isoform X14

    UniProtKB/TrEMBL
    A0A8M3BCD1
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4429 → 4482
    zf-RING_2; Ring finger domain

  16. XM_009304558.4 → XP_009302833.1  E3 ubiquitin-protein ligase MYCBP2 isoform X12

    UniProtKB/TrEMBL
    A0A8M3AVW2
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4462 → 4515
    zf-RING_2; Ring finger domain

  17. XM_009304557.4 → XP_009302832.1  E3 ubiquitin-protein ligase MYCBP2 isoform X11

    UniProtKB/TrEMBL
    A0A8M3B2J4
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4471 → 4524
    zf-RING_2; Ring finger domain

  18. XM_009304553.4 → XP_009302828.1  E3 ubiquitin-protein ligase MYCBP2 isoform X7

    UniProtKB/TrEMBL
    A0A8M3AVV4
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4483 → 4536
    zf-RING_2; Ring finger domain

  19. XM_009304552.4 → XP_009302827.1  E3 ubiquitin-protein ligase MYCBP2 isoform X6

    UniProtKB/TrEMBL
    A0A8M3B2J0
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4484 → 4537
    zf-RING_2; Ring finger domain

  20. XM_017357656.3 → XP_017213145.1  E3 ubiquitin-protein ligase MYCBP2 isoform X4

    UniProtKB/TrEMBL
    A0A8M6Z803

  21. XM_009304549.4 → XP_009302824.1  E3 ubiquitin-protein ligase MYCBP2 isoform X2

    UniProtKB/TrEMBL
    A0A8M3BCC4
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4516 → 4569
    zf-RING_2; Ring finger domain

  22. XM_009304548.4 → XP_009302823.1  E3 ubiquitin-protein ligase MYCBP2 isoform X1

    UniProtKB/TrEMBL
    A0A8M3AVU9
    Conserved Domains (7) summary
    COG5184
    Location:615 → 1019
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:951 → 999
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam00630
    Location:2384 → 2425
    Filamin; Filamin/ABP280 repeat
    pfam08005
    Location:1720 → 1877
    PHR; PHR domain
    pfam08239
    Location:2470 → 2530
    SH3_3; Bacterial SH3 domain
    pfam13540
    Location:674 → 703
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
    pfam13639
    Location:4517 → 4570
    zf-RING_2; Ring finger domain

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394745.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    220341..485433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395276.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    1679..148007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_3

Genomic

  1. NW_018395383.1 Reference GRCz11 ALT_DRER_TU_3

    Range
    14064..19592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F1RD40.1 GenPept UniProtKB/Swiss-Prot:F1RD40

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