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OCT59_003906 uncharacterized protein [ Rhizophagus irregularis ]

Gene ID: 36884223, updated on 10-Jul-2024

Summary

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Gene symbol
OCT59_003906
Gene description
uncharacterized protein
Locus tag
OCT59_003906
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhizophagus irregularis (isolate: DAOM-197198)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus
Old locus tag
GLOIN_2v711147
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Genomic context

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See OCT59_003906 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Sequence:
Chromosome: 12; NC_089440.1 (1602920..1603892, complement)

Chromosome 12 - NC_089440.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089440.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089440.1 Reference assembly

    Range
    1602920..1603892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025333925.2 → XP_025184872.1  uncharacterized protein OCT59_003906 [Rhizophagus irregularis]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A015JEA1, A0A2I1DUJ2, A0A2I1FV82, U9UI06
    Conserved Domains (1) summary
    cl14615
    Location:30 → 256
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
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