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OCT59_011374 uncharacterized protein [ Rhizophagus irregularis ]

Gene ID: 36884645, updated on 10-Jul-2024

Summary

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Gene symbol
OCT59_011374
Gene description
uncharacterized protein
Locus tag
OCT59_011374
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhizophagus irregularis (isolate: DAOM-197198)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus
Old locus tag
GLOIN_2v96359
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Genomic context

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See OCT59_011374 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Sequence:
Chromosome: 19; NC_089447.1 (3810522..3813251, complement)

Chromosome 19 - NC_089447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089447.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089447.1 Reference assembly

    Range
    3810522..3813251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025334347.2 → XP_025177718.1  uncharacterized protein OCT59_011374 [Rhizophagus irregularis]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I1H0Z6, A0A2N1MS13, U9UYM6
    Conserved Domains (2) summary
    cl02553
    Location:255 → 608
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam02148
    Location:139 → 200
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
Nucleotide Protein
Heading Accession and Version

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