U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

OCT59_015305 uncharacterized protein [ Rhizophagus irregularis ]

Gene ID: 36884649, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
OCT59_015305
Gene description
uncharacterized protein
Locus tag
OCT59_015305
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhizophagus irregularis (isolate: DAOM-197198)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus
Old locus tag
GLOIN_2v964226
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See OCT59_015305 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
1
Sequence:
Chromosome: 23; NC_089451.1 (1586490..1588091, complement)

Chromosome 23 - NC_089451.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_089451.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089451.1 Reference assembly

    Range
    1586490..1588091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025334351.2 → XP_025189014.1  uncharacterized protein OCT59_015305 [Rhizophagus irregularis]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A015L530, A0A2H5RL99, A0A2I1DR37, A0A2N0QCV0, A0A2N1MYZ5
    Conserved Domains (2) summary
    cl28917
    Location:298 → 522
    Alpha_kinase; Alpha kinase family
    cl00057
    Location:58 → 170
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases