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CG11400 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36935, updated on 9-Dec-2024

Summary

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Official Symbol
CG11400provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034198
Locus tag
Dmel_CG11400
See related
AllianceGenome:FB:FBgn0034198
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG11400
Summary
Is expressed in embryonic/larval midgut and organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG11400 in Genome Data Viewer
Location:
54A1-54A1; 2-82 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17134129..17135345)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13021634..13022850)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 54A1 Neighboring gene pseudo Neighboring gene Growth-blocking peptide 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interaction of coactivators with promoter. Soshnikova NV, et al. Dokl Biochem Biophys, 2008 Nov-Dec. PMID 19230385
  2. Transcription coactivator SAYP combines chromatin remodeler Brahma and transcription initiation factor TFIID into a single supercomplex. Vorobyeva NE, et al. Proc Natl Acad Sci U S A, 2009 Jul 7. PMID 19541607, Free PMC Article
  3. A global genetic interaction network by single-cell imaging and machine learning. Heigwer F, et al. Cell Syst, 2023 May 17. PMID 37116498, Free PMC Article
  4. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
  5. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG11400-PA
CG11400-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17134129..17135345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299591.1 → NP_001286520.1  uncharacterized protein Dmel_CG11400, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286520.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JV39

  2. NM_137349.3 → NP_611193.1  uncharacterized protein Dmel_CG11400, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611193.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JV39
    Related
    FBpp0086138
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7JV39 Q7JV39

Gene LinkOut

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