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CG5742 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37072, updated on 4-Jan-2025

Summary

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Official Symbol
CG5742provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034304
Locus tag
Dmel_CG5742
See related
AllianceGenome:FB:FBgn0034304
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5742
Summary
Predicted to enable signaling receptor binding activity. Predicted to be involved in protein retention in ER lumen. Predicted to be active in cytoplasm. Is expressed in organism. Orthologous to human ANKRD13C (ankyrin repeat domain 13C). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG5742 in Genome Data Viewer
Location:
55B9-55B9; 2-84 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18148096..18151410, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14035601..14038915, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene poly(A) binding protein Neighboring gene Essential MCU regulator Neighboring gene adipose Neighboring gene lola like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article
  2. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
  3. A genetic screen and transcript profiling reveal a shared regulatory program for Drosophila linker histone H1 and chromatin remodeler CHD1. Kavi H, et al. G3 (Bethesda), 2015 Jan 27. PMID 25628309, Free PMC Article
  4. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article
  5. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables signaling receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein retention in ER lumen IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG5742-PA
CG5742-PB
CG5742-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18148096..18151410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001274139.2 → NP_001261068.1  uncharacterized protein Dmel_CG5742, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261068.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K3G2
    Conserved Domains (4) summary
    cd00204
    Location:86 → 175
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:234 → 534
    GPCR_chapero_1; GPCR-chaperone
    pfam13857
    Location:104 → 156
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:86 → 116
    ANK; ANK repeat [structural motif]

  2. NM_137451.4 → NP_611295.1  uncharacterized protein Dmel_CG5742, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611295.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K3G2
    Related
    FBpp0085959
    Conserved Domains (4) summary
    cd00204
    Location:86 → 175
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:234 → 534
    GPCR_chapero_1; GPCR-chaperone
    pfam13857
    Location:104 → 156
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:86 → 116
    ANK; ANK repeat [structural motif]

  3. NM_001274140.2 → NP_001261069.1  uncharacterized protein Dmel_CG5742, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261069.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KFB5
    Conserved Domains (4) summary
    cd00204
    Location:86 → 175
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:234 → 534
    GPCR_chapero_1; GPCR-chaperone
    pfam13857
    Location:104 → 156
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:86 → 116
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KFB5 A0A0B4KFB5
Q7K3G2 Q7K3G2

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