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Cth Cystathionine gamma-lyase [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37143, updated on 9-Dec-2024

Summary

Official Symbol
Cthprovided by FlyBase
Official Full Name
Cystathionine gamma-lyaseprovided by FlyBase
Primary source
FLYBASE:FBgn0000566
Locus tag
Dmel_CG5345
See related
AllianceGenome:FB:FBgn0000566
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5345; cse; CSE; Dmel\CG5345; Eip40; EIP40; Eip55BD; Eip55E; LD22255
Summary
Predicted to enable cystathionine gamma-lyase activity and pyridoxal phosphate binding activity. Involved in glutathione biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including embryonic/larval midgut primordium; gut section; larval muscle cell; mesoderm; and visceral mesoderm derivative. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and cystathioninuria. Orthologous to human CTH (cystathionine gamma-lyase). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See Cth in Genome Data Viewer
Location:
55E2-55E2; 2-86 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18627918..18629395)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14515423..14516900)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Autophagy-related 7 Neighboring gene uncharacterized protein Neighboring gene Secretory 6 Neighboring gene zonda Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cystathionine gamma-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables cystathionine gamma-lyase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables cystathionine gamma-lyase activity TAS
Traceable Author Statement
more info
PubMed 
enables pyridoxal phosphate binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cysteine biosynthetic process via cystathionine IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glutathione biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sulfur amino acid metabolic process NAS
Non-traceable Author Statement
more info
PubMed 
involved_in transsulfuration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in transsulfuration IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
cystathionine gamma-lyase
Names
CG5345-PA
CG5345-PB
Cth-PA
Cth-PB
Ecdysone-induced polypeptide 40kD
Ecdysone-induced protein 40kD
Ecdysone-induced protein 55E
Eip55E
cystathionine-gamma-lyase
ecdysone induced protein 55E
NP_001286578.1
NP_611352.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18627918..18629395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299649.1NP_001286578.1  cystathionine gamma-lyase, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286578.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O97121, Q7JXZ2
    Conserved Domains (2) summary
    PRK08776
    Location:7393
    PRK08776; cystathionine gamma-synthase; Provisional
    pfam01053
    Location:11388
    Cys_Met_Meta_PP; Cys/Met metabolizm PLP-dependent enzyme
  2. NM_137508.4NP_611352.1  cystathionine gamma-lyase, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611352.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O97121, Q7JXZ2
    Related
    FBpp0085889
    Conserved Domains (2) summary
    PRK08776
    Location:7393
    PRK08776; cystathionine gamma-synthase; Provisional
    pfam01053
    Location:11388
    Cys_Met_Meta_PP; Cys/Met metabolizm PLP-dependent enzyme