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CG15073 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37155, updated on 9-Dec-2024

Summary

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Official Symbol
CG15073provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0034379
Locus tag
Dmel_CG15073
See related
AllianceGenome:FB:FBgn0034379
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG15073
Summary
Predicted to enable DNA-binding transcription factor activity and transcription cis-regulatory region binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See CG15073 in Genome Data Viewer
Location:
55E9-55E9; 2-86 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18705977..18708226)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14593482..14595731)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Salt-inducible kinase 3 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR33942 Neighboring gene Vacuolar protein sorting 51 Neighboring gene Heparan sulfate 3-O sulfotransferase-A Neighboring gene mir-4982 stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A putative amino acid transporter of the solute carrier 6 family is upregulated by lithium and is required for resistance to lithium toxicity in Drosophila. Kasuya J, et al. Neuroscience, 2009 Oct 20. PMID 19619614, Free PMC Article
  2. Salt inducible kinases as novel Notch interactors in the developing Drosophila retina. Şahin HB, et al. PLoS One, 2020. PMID 32542037, Free PMC Article
  3. Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila. Bonchuk A, et al. Nucleic Acids Res, 2021 Feb 26. PMID 33638995, Free PMC Article
  4. Genomic expansion and clustering of ZAD-containing C2H2 zinc-finger genes in Drosophila. Chung HR, et al. EMBO Rep, 2002 Dec. PMID 12446571, Free PMC Article
  5. ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster. Zolotarev NA, et al. Acta Naturae, 2016 Jul-Sep. PMID 27795848, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transcription cis-regulatory region binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15073-PA
CG15073-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18705977..18708226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137518.3 → NP_611362.2  uncharacterized protein Dmel_CG15073, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611362.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZBC5, B5X520, Q8SYU8
    Related
    FBpp0085790
    Conserved Domains (2) summary
    sd00017
    Location:437 → 458
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam07776
    Location:2 → 78
    zf-AD; Zinc-finger associated domain (zf-AD)

  2. NM_001299659.1 → NP_001286588.1  uncharacterized protein Dmel_CG15073, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286588.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LG07, Q8SYU8
    Conserved Domains (3) summary
    sd00017
    Location:408 → 429
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam07776
    Location:2 → 78
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam13465
    Location:450 → 474
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LG07 A0A0B4LG07
A1ZBC5 A1ZBC5
Q8SYU8 Q8SYU8

Gene LinkOut

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