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Obp57c Odorant-binding protein 57c [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37311, updated on 9-Dec-2024

Summary

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Official Symbol
Obp57cprovided by FlyBase
Official Full Name
Odorant-binding protein 57cprovided by FlyBase
Primary source
FLYBASE:FBgn0034509
Locus tag
Dmel_CG13421
See related
AllianceGenome:FB:FBgn0034509
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
57c; BcDNA:RH68952; CG13421; DmelObp57c; Dmel\CG13421; Obp57a; obp57c; OBP57c
Summary
Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Is expressed in antenna; labellum; and sense organ. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Obp57c in Genome Data Viewer
Location:
57A4-57A4; 2-91 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20503584..20504202)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16391089..16391707)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene sidestep VIII Neighboring gene long non-coding RNA:CR44643 Neighboring gene Odorant-binding protein 57b Neighboring gene Odorant-binding protein 57a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel odorant-binding proteins expressed in the taste tissue of the fly. Koganezawa M, et al. Chem Senses, 2002 May. PMID 12006372
  2. Aging and Autophagic Function Influences the Progressive Decline of Adult Drosophila Behaviors. Ratliff EP, et al. PLoS One, 2015. PMID 26182057, Free PMC Article
  3. An odorant-binding protein required for suppression of sweet taste by bitter chemicals. Jeong YT, et al. Neuron, 2013 Aug 21. PMID 23972598, Free PMC Article
  4. Rapid evolution of two odorant-binding protein genes, Obp57d and Obp57e, in the Drosophila melanogaster species group. Matsuo T. Genetics, 2008 Feb. PMID 18245367, Free PMC Article
  5. Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression. Graze RM, et al. Genetics, 2009 Oct. PMID 19667135, Free PMC Article

See all (48) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables odorant binding NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to odorant NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in sensory perception of chemical stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
Odorant-binding protein 57c
Names
CG13421-PA
Obp57c-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    20503584..20504202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137637.3 → NP_611481.1  Odorant-binding protein 57c [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611481.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8DYJ8, Q4V3N2, Q9V931
    UniProtKB/TrEMBL
    A0A1B2AK36
    Related
    FBpp0085604
    Conserved Domains (1) summary
    smart00708
    Location:28 → 131
    PhBP; Insect pheromone/odorant binding protein domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9V931.1 Q9V931

Gene LinkOut

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