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exu exuperantia [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37345, updated on 9-Dec-2024

Summary

Official Symbol
exuprovided by FlyBase
Official Full Name
exuperantiaprovided by FlyBase
Primary source
FLYBASE:FBgn0000615
Locus tag
Dmel_CG8994
See related
AllianceGenome:FB:FBgn0000615
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
bs30h09.y1; CG8994; Dmel\CG8994; Exu; exu1
Summary
Enables protein homodimerization activity and single-stranded RNA binding activity. Involved in bicoid mRNA localization and regulation of pole plasm oskar mRNA localization. Located in P-body. Part of precatalytic spliceosome. Is expressed in several structures, including adult head; centripetal follicle cell; germarium; germline cell; and pole plasm. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See exu in Genome Data Viewer
Location:
57A9-57A10; 2-91 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (20667427..20671083, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (16554932..16558588, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Leucine-rich tendon-specific protein Neighboring gene transfer RNA:Tryptophan-CCA 1-2 Neighboring gene uncharacterized protein Neighboring gene Fem-1 Neighboring gene galla-1 Neighboring gene Gustatory receptor 57a Neighboring gene pseudo

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
NOT enables exonuclease activity IKR
Inferred from Key Residues
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables single-stranded RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in P-body IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm TAS
Traceable Author Statement
more info
PubMed 
located_in cytoplasmic ribonucleoprotein granule IDA
Inferred from Direct Assay
more info
PubMed 
part_of precatalytic spliceosome HDA PubMed 

General protein information

Preferred Names
exuperantia
Names
CG8994-PA
CG8994-PB
CG8994-PC
CG8994-PD
exu-PA
exu-PB
exu-PC
exu-PD
exuperentia

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    20667427..20671083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001169747.2NP_001163218.1  exuperantia, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163218.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4UZR1, P28750, Q9V967
    UniProtKB/TrEMBL
    E1JGN9
  2. NM_166412.3NP_725997.1  exuperantia, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725997.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4UZR1, P28750, Q9V967
    UniProtKB/TrEMBL
    E1JGN9
    Related
    FBpp0085557
  3. NM_166410.3NP_725995.1  exuperantia, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725995.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4UZR1, P28750, Q9V967
    UniProtKB/TrEMBL
    E1JGN9
    Related
    FBpp0085555
  4. NM_166411.3NP_725996.1  exuperantia, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725996.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4UZR1, P28750, Q9V967
    UniProtKB/TrEMBL
    E1JGN9
    Related
    FBpp0085556