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BASP1 brain abundant membrane attached signal protein 1 [ Gallus gallus (chicken) ]

Gene ID: 373905, updated on 17-Aug-2024

Summary

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Symbol
BASP1provided by CGNC
Full Name
brain abundant membrane attached signal protein 1provided by CGNC
Primary source
CGNC:9805
See related
Ensembl:ENSGALG00010000822
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CAP-23
Orthologs
human mouse all
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Genomic context

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See BASP1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (75010149..75060662, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (75014160..75065313, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 7-like Neighboring gene uncharacterized LOC121109865 Neighboring gene uncharacterized LOC124418322 Neighboring gene uncharacterized LOC121109785 Neighboring gene myosin X Neighboring gene microRNA 1766

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification, localization, and primary structure of CAP-23, a particle-bound cytosolic protein of early development. Widmer F, et al. J Cell Biol, 1990 Dec. PMID 2148567, Free PMC Article
  2. Inhibition of Myc-induced cell transformation by brain acid-soluble protein 1 (BASP1). Hartl M, et al. Proc Natl Acad Sci U S A, 2009 Apr 7. PMID 19297618, Free PMC Article
  3. Intrinsic neuronal determinants locally regulate extrasynaptic and synaptic growth at the adult neuromuscular junction. Caroni P, et al. J Cell Biol, 1997 Feb 10. PMID 9024697, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
brain acid soluble protein 1 homolog
Names
23 kDa cortical cytoskeleton-associated protein
brain acid soluble protein 1 homolog23 kDa cortical cytoskeleton-associated protein
particle bound cytosolic protein CAP23

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204116.4 → NP_989447.1  brain acid soluble protein 1 homolog

    See identical proteins and their annotated locations for NP_989447.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000040
    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001029.1, ENSGALT00010001828.1
    Conserved Domains (1) summary
    pfam05466
    Location:44 → 244
    BASP1; Brain acid soluble protein 1 (BASP1 protein)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    75010149..75060662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040674082.2 → XP_040530016.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001028.1, ENSGALT00010001827.1
    Conserved Domains (1) summary
    pfam05466
    Location:44 → 244
    BASP1; Brain acid soluble protein 1 (BASP1 protein)

  2. XM_046917031.1 → XP_046772987.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  3. XM_025146989.3 → XP_025002757.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001024.1, ENSGALT00010001823.1
    Conserved Domains (1) summary
    pfam05466
    Location:44 → 244
    BASP1; Brain acid soluble protein 1 (BASP1 protein)

  4. XM_046917030.1 → XP_046772986.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001022.1, ENSGALT00010001821.1

  5. XM_046917021.1 → XP_046772977.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001019.1, ENSGALT00010001818.1

  6. XM_046917024.1 → XP_046772980.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
    Related
    ENSGALP00010001018.1, ENSGALT00010001817.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    75014160..75065313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910146.1 → XP_046766102.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  2. XM_046910148.1 → XP_046766104.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  3. XM_046910144.1 → XP_046766100.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  4. XM_046910147.1 → XP_046766103.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  5. XM_046910143.1 → XP_046766099.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7

  6. XM_046910145.1 → XP_046766101.1  brain acid soluble protein 1 homolog isoform X1

    UniProtKB/Swiss-Prot
    P23614, Q8JHB7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23614.4 GenPept UniProtKB/Swiss-Prot:P23614

Gene LinkOut

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